KEGG   Rattus norvegicus (rat): 680891
Entry
680891            CDS       T01003                                 
Symbol
Sf3b5
Name
(RefSeq) splicing factor 3B subunit 5
  KO
K12832  splicing factor 3B subunit 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    680891 (Sf3b5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    680891 (Sf3b5)
Spliceosome [BR:rno03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    680891 (Sf3b5)
 Complex B
    680891 (Sf3b5)
 Complex C
   U2 SnRNP specific factors
    680891 (Sf3b5)
SSDB
Motif
Pfam: SF3b10 DUF2264
Other DBs
NCBI-GeneID: 680891
NCBI-ProteinID: NP_001119564
RGD: 1586993
Ensembl: ENSRNOG00000014908
UniProt: A6JP52 D4A5T1
Position
1:9177189..9177901
AA seq 86 aa
MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENES
KARVRFNLMEKMLQPSGPPADKPEEN
NT seq 261 nt   +upstreamnt  +downstreamnt
atgacggaccggtacaccatccacagccagctcgagcatctgcagtccaagtacatcggc
acgggccacgccgacaccaccaagtgggaatggcttgtgaaccagcatcgggattcctac
tgctcctacatgggtcacttcgacctcctcaactacttcgccattgctgagaatgagagc
aaagcgcgcgtgcgtttcaacctgatggagaaaatgctgcagcccagcgggccgccggcg
gacaagccggaggagaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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