KEGG   Rattus norvegicus (rat): 680912
Entry
680912            CDS       T01003                                 
Symbol
Kcnu1
Name
(RefSeq) potassium channel subfamily U member 1 isoform X6
  KO
K05274  potassium large conductance calcium-activated channel subfamily M alpha member 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04022  cGMP-PKG signaling pathway
rno04270  Vascular smooth muscle contraction
rno04911  Insulin secretion
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04022 cGMP-PKG signaling pathway
    680912 (Kcnu1)
 09150 Organismal Systems
  09152 Endocrine system
   04911 Insulin secretion
    680912 (Kcnu1)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    680912 (Kcnu1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    680912 (Kcnu1)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Potassium channel, calcium- and sodium-activated (KCa/KNa)
   680912 (Kcnu1)
SSDB
Motif
Pfam: BK_channel_a Ion_trans Ion_trans_2 Lig_chan TrkA_N DUF6609
Other DBs
NCBI-GeneID: 680912
NCBI-ProteinID: XP_038950863
RGD: 1585877
Ensembl: ENSRNOG00000014741
Position
16:complement(72844692..72932216)
AA seq 924 aa
MSQTLLDNLNKKELTETSCTIEIQAAFILSSLATFFGGLIVLFIFRIALKISRNWKTVKG
PRGILELFSSRRIEVNPLRKLYFHGVFRERIEMLLSAQTIVGQVLVILVFVLSIGSLVIY
FINSMDPVRKCSSYEDKIVHVDLSFNAFFSFYFGLRFWAAEDKIKFWLEMNSIVDIFTIP
PTFISYYLKSNWLGLRFLRALRLLELPKILQILQVIKTSNSVKLSKLMSIVISTWFTAAG
FLHLTFPLPSLFGQVENSGDPWLNGRNSQTMSYFESIYLVTATMSTVGFGDVVAKTSLGR
IFIVFFTLGSLILFANYIPEMVELFSTRKKYNKPYEAVKGKKFIVVCGNITIDSVTAFLR
NFLHRKAGEINIEIVFLGEAPPSVELETLLKCHTSCTTFVCGTALKFEDLKRVAVENAEA
CLILANPFCSDLHDEDNSNIMRVLSIKNYYPQTRVIIQMLQSQNKVFLSRIPNWNWSAGD
NIICFAELKLGFIAQGCLVPGLCTFLTTLFIEQNQKVFPKHPWQKHFLNGLKNKILTQRL
SNDFVGMTFPQVSRLCFLKMHLMLIAIQHKPLFHNCCSLILNPSSQVRLNKDTLGFFIAE
SSKDVKRALFYCSNCHSDVCNPELIGKCGCKNRSRQQLVAPTIMVMQSSLNEFAPTAEIY
TSISREQTSSVTILTTRNMPVDTADDSDMLDSSGMFHWCRSMPLDKVVLKRSDKATHEFQ
NHIVACVFGDAHSSLMGLRNFVMPLRASNYTRQELKDIVFIGSLEYFQREWRFLRNFPKI
HIMPGSALYTGDLHAVNVEQCSMCVILATPYKALSSQLLVDTETIMATLNIQALRISCPM
SGSSKKEVNTSPTFSKYEGKQRYQQIPILTELKNPSNIHFIEQMDGLDEAIKGTSLHLST
AFSTGTVFSGTFLDSLLATQYNSD
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgtctcaaacattgctagacaatttaaataagaaagaattgacggaaacgtcatgtaca
atcgaaatccaagcagcattcattctctcctccttggcgactttcttcgggggactaatc
gtcttgttcattttcagaatagccttgaaaatctcaagaaactggaaaaccgtcaagggg
ccaagagggatcttggaactattttcatcacgtaggatcgaggttaatcctttgagaaaa
ctttactttcatggagtatttcgtgagcgtatcgaaatgctgctttctgcgcagaccatt
gtggggcaagtgttggtgatcctcgtctttgtgctaagcatcgggtctcttgtgatctat
ttcatcaattcaatggaccctgttcgaaagtgttcttcatatgaagacaaaattgtccat
gtggatttgagtttcaatgctttctttagtttctactttgggttgaggttttgggcagct
gaagacaagatcaagttctggttggagatgaattcaattgtagacatttttaccatccca
ccaacctttatttcctattatttgaagagtaattggctgggtttgaggtttttaagagct
ctgcggttgctcgaacttcctaaaatcttacagatcctgcaagtcatcaagaccagcaat
tcagtgaagctttccaaactgatgtcaatcgttatcagtacctggttcacagcagcagga
ttccttcacctgacctttcccttgccatctctctttggacaggtagaaaattctggtgac
ccctggctcaatggtagaaactcgcagacgatgtcatacttcgagtccatttatctggtg
acggcaacaatgtcaactgttggctttggggatgtggtggccaagacttccctgggacgg
attttcatcgtcttcttcacccttggaagtttgatactatttgcaaactacattccagaa
atggtggagcttttttctaccaggaagaaatacaacaagccctacgaagcagtcaaggga
aagaagttcatcgtggtctgtggaaacatcacaattgacagtgtgactgctttcctaagg
aattttctccaccggaaggcaggagaaatcaatatcgagatcgtgttccttggagaggct
cctccttccgtggaactagaaaccttgctcaagtgccacacatcctgcaccacctttgta
tgtggcaccgcgctgaagttcgaggatctgaagagagttgcagtggagaacgcagaagcc
tgcctgatcctagccaacccattctgcagtgacttgcacgacgaggataactcgaacatc
atgagggtgctctcgatcaagaactattatccacagaccagagtcatcattcagatgctt
cagtcccaaaacaaggttttcctgtcaagaatccccaactggaactggagtgccggagac
aatatcatctgctttgcagaattaaaacttggatttatcgcccaaggctgcttggtgcca
gggctgtgcacctttcttacgactctgtttatcgaacaaaaccaaaaggtttttcctaaa
catccttggcaaaaacatttcttgaatggcttgaagaacaaaattctgacacagcgcctc
tctaacgacttcgttgggatgacgtttcctcaggtctccaggctctgcttcctgaagatg
catctcatgctgatagccatccaacacaagcccctcttccacaattgttgctctctgata
ctaaatccatcatcacaagtgaggctgaataaggacaccttagggttcttcatcgcagaa
tcctcgaaagacgtcaaaagagccctcttttactgctccaactgtcacagcgatgtgtgc
aatcctgagctgattgggaagtgtggctgcaaaaacaggagccgacagcaactcgtggcg
ccaaccatcatggtgatgcaaagcagcttgaacgaattcgcccccactgcagaaatttac
acttctatttcaagagaacagacgagctcagtcaccattttaacaaccaggaacatgccg
gttgacacagcagatgattcggacatgctagacagcagcggcatgtttcactggtgtaga
tcaatgcccttggacaaggtggttctgaaacgatctgacaaggcaacacacgagtttcag
aaccacatagtggcatgcgtgtttggagacgcccactcttccctgatggggctccggaat
ttcgtgatgcccctgagagccagcaactacacccggcaggagctgaaggacattgttttc
attgggtcccttgaatacttccagagagaatggcggtttctccggaactttcccaagata
cacattatgcctggatctgcgctctatactggagatctgcatgcagtcaatgtagagcag
tgttctatgtgtgttatcttagccaccccttacaaggcactgagcagccagcttctggtg
gacactgagaccatcatggccaccctcaacatccaggccctgcggatcagctgccctatg
tcagggtcttcaaagaaagaagtaaatacatcacctactttttctaaatatgaagggaag
caaagataccagcagatccccattctcactgaactgaagaatccctccaacatccacttt
attgagcagatggatggactggacgaagcgatcaaaggaacaagcttgcacctcagcact
gccttctctacgggtactgtcttttcgggcaccttcttggattctctcctggccacgcaa
tacaacagtgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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