KEGG   Rattus norvegicus (rat): 681359
Entry
681359            CDS       T01003                                 
Symbol
E4f1
Name
(RefSeq) transcription factor E4F1
  KO
K22401  transcription factor E4F1 / E3 ubiquitin-protein ligase [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    681359 (E4f1)
   04121 Ubiquitin system [BR:rno04121]
    681359 (E4f1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     681359 (E4f1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    681359 (E4f1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Atypical E3
   681359 (E4f1)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_jaz zf-C2H2_6 zf-C2H2_11 zf-C2H2_8 LIM zf-C2H2_2 zf-C2HC_2 XPA_N HypA
Other DBs
NCBI-GeneID: 681359
NCBI-ProteinID: NP_001171975
RGD: 1596731
Ensembl: ENSRNOG00000009224
UniProt: F1MAM9 A6HCS6
Position
10:complement(13978975..13999646)
AA seq 783 aa
MEGAMAVRVTAAHTAEARAEAGHEAGEGGVAAAAALSNGGFLGLPAPFSEEDEDDVHRCG
RCQVEFTALEDFVQHKIQKTCHRAPQEALPTTSAATSLLGQEVVPTAAEEGPEEPITVAH
IVVEATSLAEDMSHAPDLVGSGHIKEVIVAAEAEPGDGEMAEAPGSPNHQELGLIGEGEQ
AQVKLLVNKEGRYVCMLCHKTFKTGSILKAHMVTHSSRKDHECKLCGASFRTKGSLIRHH
RRHTDERPYKCAKCGKSFRESGALTRHLKSLTPCTEKIRFSISKDTAVGKEEVPAGSSAS
TVGTVTSSVAGEPMETSPVIHLVTDAKGTVIHEVHVQMQELPLGMKALTPESADCEELPC
SRENSRENLLHQAMQNSGIVLDRVAGEESTLQPAPPSGSSPQSLGDGPSELPLLEVEQIE
TQVASEAATVPRTHPCSQCSETFPSAATLEAHKRGHIGPRPFTCTQCGKAFPKAYLLKKH
QEVHVHERRFRCGDCGKLYKTIAHVRGHRRVHSDERPFPCPQCGKRYKTKNAQQVHFRTH
LEEKPHVCQFCSRGFREKGSLVRHVRHHTGEKPFKCYKCGRGFAEHGTLNRHLRTKGGCL
LEVEELLVSEESPSAAATVLAEDPHTVLVEFSSVVADTQEYIIEATADDTETSEATEIIE
GTQTEVDSHIMKVVQQIVHQAGAGHQIIVQNVTMDQEAALGSEAAAADTITIATPESLTE
QVAMTLASAISEGTVLTARAGPNSTEQATVTMVSSEDIEILEHGGELVIASPEGQLEVQT
VIV
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggagggcgcgatggcagtgcgggtgacggccgctcatacggcagaagcccgggccgaa
gccgggcatgaagcgggcgagggcggggttgcagcggcggcggccttgtccaacggcggc
tttcttgggctcccagcgcccttcagcgaggaagatgaggatgacgtacacagatgtgga
cgctgccaagtggaattcactgccttggaggactttgtccagcacaagattcagaagacc
tgccatcgggccccacaagaggccctgcccaccacctctgctgccacttcgttgctgggc
caggaggtggtgccaacagcagcagaggaaggtccagaggaacccatcactgtggcccac
atcgtggtggaggccacctctctggcagaagacatgagccatgctcctgaccttgttgga
agtgggcacatcaaagaggtcattgtggctgctgaggcagagccaggggatggcgagatg
gcagaggctccaggcagtcctaaccatcaggaacttgggcttattggggagggcgagcag
gcccaagtcaagctgctggtgaacaaggaaggccgctacgtgtgcatgctatgtcacaag
accttcaaaacgggcagcatcctcaaggctcacatggtaacacacagcagccgcaaggac
cacgagtgcaagctctgtggggcctcctttcggaccaagggctctctgatccggcaccac
cgacggcacactgatgagcgtccctacaaatgtgccaagtgtgggaagagtttccgagag
tcaggcgcactgactcggcacctcaaatctctcactccatgcacagaaaagatccgtttc
agcataagcaaggacacagccgtgggcaaagaggaagtgcctgcagggtccagtgcctcc
actgtggggacagtgacatcgtcagtggcaggagaacccatggagacatcacctgtgatt
cacctggtgacagatgccaagggcactgtcatccatgaagtccatgtccagatgcaggag
cttcccctgggcatgaaagccctgaccccagagtcggcagactgtgaggagcttccctgc
tcccgtgagaacagccgggagaacctgctacatcaggccatgcagaattctggcatcgtc
ctcgacagggttgctggggaggagagtaccctgcagccagcccctccttctgggtccagt
ccccagtccctgggagatggaccctcagagctgccactgctggaggtggagcagatagag
acacaggtagccagtgaggcagccactgtgcccaggacccacccgtgctctcagtgcagt
gagactttcccatcagcggctaccttggaggcccacaagagaggtcatatagggccgagg
ccattcacctgcacacagtgtggcaaggccttccccaaagcctacctgctcaagaagcac
caggaggtgcatgtgcacgagcgccgcttccgttgtggagactgtgggaagctttataag
accattgcccatgtgcggggccaccggcgtgtccactccgacgagaggcctttcccttgt
ccccagtgtggcaagcgttacaagaccaagaatgcccagcaagtgcacttccggacacat
ttggaagaaaagccccacgtgtgccagttctgcagccgaggcttccgggagaagggctct
ctagtgcggcatgtgaggcaccacaccggcgagaaacctttcaagtgctacaaatgtggc
cgtggctttgcagagcatggcacactcaaccggcacctgcgcactaaagggggctgcctg
ctcgaagtggaggagttgctggtatccgaggagagcccctctgcggctgctactgtgctt
gcagaagacccccacacggtgctggtggagttctcatctgtggtggctgatacccaagag
tacattattgaggctactgcggatgacacagagaccagtgaagccactgagatcattgag
ggcacgcagacagaggtggatagtcacatcatgaaggtggtccagcagatcgtgcaccag
gctggcgctgggcaccagatcattgtgcagaatgtgaccatggaccaggaggcagcactg
ggctcagaggcagctgccgcggacacgatcaccattgccactcctgagagtcttactgag
caggtggccatgacgctggcttcagccatcagtgagggcactgtgctcacagcccgggca
gggccaaacagtactgaacaggccactgtgacaatggtgtcatcagaggacatcgagatc
cttgagcacggaggggagctggtcattgcttcaccagagggccagcttgaggtgcagaca
gtcattgtatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (42)   

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