KEGG   Rattus norvegicus (rat): 683603
Entry
683603            CDS       T01003                                 
Symbol
Zscan2
Name
(RefSeq) zinc finger and SCAN domain containing 2
  KO
K09230  SCAN domain-containing zinc finger protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    683603 (Zscan2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    683603 (Zscan2)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_6 zf-C2H2_jaz SCAN Zn-ribbon_8 zf_UBZ Zn_ribbon_SprT zf-C2H2_11 C1_4 zf-met zf-Di19 HVO_2753_ZBP TBPIP_C
Other DBs
NCBI-GeneID: 683603
NCBI-ProteinID: NP_001414652
RGD: 1584548
Ensembl: ENSRNOG00000022164
Position
1:144243082..144258192
AA seq 614 aa
MAAEVPAVSTPLSPLAQVPQEEDEQAEVTTMILEDDSWVQEAVLQEDGPESEPFPQSTGK
GSPQEEGTAEGPRGALVRFRELCRRWLRPEVHTKEQMLTVLPREIQAWLQEHRPESSEEA
VALVEDLTQTFPHNDFEIQSENGENSNQDVFEDVESHETFLKIPGGEGGQQSDGESDFER
DCGSGGAQGNVPGEEHRDLPSEGREVGQLIGLQGTYLGEKPYECPQCGKTFSRKSHLITH
ERTHTGEKYYKCEECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRIH
TGEKPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEK
PYACKECGESFSYNSNLIRHQRIHTGEKPYKCTECGQKFSQSSALITHRRTHTGEKPYQC
SECGKSFSRSSNLATHRRTHLVEKPYKCGVCGKSFSQSSSLIAHQGMHTGEKPYECLTCG
ESFSWSSNLIKHQRIHTGEKPYKCGDCGKCFSQRSQLVVHQRTHTGEKPYQCLMCGKSFS
RGSILVMHQRAHLGEKPYRCPECGKGFSWNSVLIIHQRIHTGEKPYKCPECGKGFSNSSN
FITHQRTHLKEKLY
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggcagctgaagtgccagcagtgagcactcccctcagccctttggctcaggtgcctcaa
gaagaagatgaacaggcagaggttaccactatgatcctggaggatgattcgtgggtacag
gaagcagtgctgcaggaggatggccccgagtctgagccctttccccagagtactggaaaa
ggcagccctcaagaggagggtacagctgagggacctcggggtgcgcttgtccgatttcgg
gagctctgtcggcgctggctgaggccagaggtgcacactaaggaacagatgctgactgtg
cttccaagagagattcaggcctggctgcaagaacatcgtcctgagagcagcgaggaggca
gtggccctggtggaagacttgacccagacttttccgcacaatgattttgagatacagagt
gagaatggggagaactcaaatcaagacgtgtttgaggatgtggaatcacacgagacgttc
ttgaaaatccctggaggggagggtggtcagcagtcggatggggagagtgactttgagaga
gactgtggctcaggaggcgcccagggaaatgtcccaggtgaggagcacagggacctgcca
tcggaaggaagggaagttggccagctaataggccttcagggcacctacctgggtgagaag
ccttatgagtgtccccagtgtgggaaaactttcagccggaagtcccacctcatcacccat
gaacggacgcacacaggagagaagtactacaaatgtgaggagtgtgggaagagctttagt
gacggctcgaacttcagtagacaccaaacgactcacaccggagagaaaccgtacaaatgc
cgggactgtgggaagagctttagccggagcgcgaaccttatcacgcaccagaggatccac
acaggcgagaagcctttccagtgtgccgagtgtggcaagagcttcagccggagccccaac
ctcatcgctcatcagcgcacgcacacaggtgaaaaaccgtactcatgccctgagtgtggg
aagagctttggcaaccgatccagccttaatactcaccagggaattcacactggagaaaaa
ccctatgcgtgtaaggaatgtggcgaaagcttcagttacaactccaacctgatcagacac
cagaggatccacacgggagagaaaccatacaaatgtaccgagtgcggacagaagttcagc
cagagctcagcgctcattacccaccgaagaacacacacgggggagaagccgtatcagtgc
agcgagtgcggcaaaagcttcagccgcagctccaatctggccactcaccggcgaacccac
ctggtggagaagccctacaagtgtggggtgtgtggcaagagcttcagccagagctccagc
ctgatcgcacaccagggcatgcacacgggggagaagccctatgagtgccttacgtgcgga
gagagcttcagctggagctccaacctcatcaagcaccagaggatccacaccggggagaag
ccatacaaatgcggcgactgtgggaaatgcttcagccagcgctcgcagctggtagtgcac
cagcggactcacacgggggagaagccctaccagtgcctcatgtgtgggaagagcttcagc
cggggttccattctggtaatgcaccagcgcgcgcacttgggagagaagccttacaggtgc
cccgagtgtgggaaaggcttcagttggaactcagttctcatcatacaccagcggattcat
acgggagagaagccctacaagtgccccgagtgtggcaaaggcttcagcaatagctccaac
tttatcacgcaccagaggactcacctgaaagagaaactttactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (29)   

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