KEGG   Rattus norvegicus (rat): 683788
Entry
683788            CDS       T01003                                 
Symbol
Fscn1
Name
(RefSeq) fascin
  KO
K23551  fascin 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    683788 (Fscn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    683788 (Fscn1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    683788 (Fscn1)
Membrane trafficking [BR:rno04131]
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    683788 (Fscn1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     683788 (Fscn1)
SSDB
Motif
Pfam: Fascin FRG1 FGF DUF569
Other DBs
NCBI-GeneID: 683788
NCBI-ProteinID: NP_001094276
RGD: 1583309
Ensembl: ENSRNOG00000056585
UniProt: P85845
Position
12:complement(16710601..16723734)
AA seq 493 aa
MTANGTAEAVQIQFGLISCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAV
CLRSHLGRYLAADKDGNVTCEREVPDGDCRFLVVAHDDGRWSLQSEAHRRYFGGTEDRLS
CFAQSVSPAEKWSVHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLA
FQDQRYSVQTSDHRFLRHDGRLVARPEPATGFTLEFRSGKVAFRDCEGRYLAPSGPSGTL
KAGKATKVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDR
DTRKCAFRTHTGKYWTLTATGGVQSTASTKNASCYFDIEWCERRITLRASNGKFVTAKKN
GQLAATVETAGDSELFLMKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSYDVFQLEFND
GAYNIKDSTGKYWTVGSDSSVTSSSDTPVDFFLEFCDYNKVALKVGGRYLKGDHAGVLKA
CAETIDPATLWEY
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgaccgccaacggcacggccgaggctgtgcagatccagttcgggctcatcagctgcggc
aacaagtacctgacagccgaggcgttcgggttcaaggtgaacgcatccgctagtagcttg
aagaagaagcagatctggacgctggagcaacctcccgatgaggcgggcagcgcggccgtg
tgtctgcgcagccacctgggtcgctacctggccgccgacaaggacggcaatgtgacctgc
gagcgcgaggtacctgacggcgactgccgcttcctcgtcgtggcacacgacgacggccgc
tggtcgctgcagtccgaggcgcaccggcgctacttcggcggcaccgaggaccgcctgtcc
tgcttcgcgcagagcgtgtcgccggccgagaagtggagcgtgcacatcgccatgcacccg
caggtcaacatctacagcgtcacccgcaagcgctacgctcatctgagcgcgcgaccggcc
gacgagatcgcggtagaccgcgacgtgccttggggcgtcgactcgctcatcaccttggcc
ttccaggaccagcgctacagcgtgcagacgtcggaccaccgcttcctgcgccacgacggg
cgccttgtggcgcggcctgagcccgccacgggcttcacactggagttccgctccggcaag
gtggcctttcgcgactgcgaaggtcgctacctggctccgtccgggcccagcggcaccctc
aaggctggcaaggccaccaaggtgggcaaagatgagctcttcgccctggaacagagctgc
gctcaggtggtgctgcaggcagccaacgagaggaacgtgtccacgcgccagggaatggac
ctgtcagccaatcaggatgaagagacggatcaggagaccttccagctggagatcgaccgg
gacacaagaaagtgtgccttccgcacccacacgggcaagtactggacgctgacagcgact
ggaggtgtgcagtccactgcatccactaagaatgccagctgctactttgacattgagtgg
tgtgagcggcggatcactctgagagcgtccaacggcaagtttgtgaccgccaagaaaaac
ggccaactggctgccactgtggagacagcaggggactcggaactcttcctcatgaagctg
attaaccgccccatcatcgtgttccgtggggagcacgggttcattggctgccgcaaggtc
acgggcaccctggacgccaatcgctccagttacgacgtctttcagctggagttcaatgat
ggcgcctacaacatcaaagactccacgggcaagtactggacggtgggtagcgactcctcg
gtcaccagcagcagcgacacccccgtggatttcttccttgagttctgtgactacaataag
gtggctctcaaggtgggcggtcgctacctgaagggggaccacgccggggtcctgaaggcc
tgcgcggagactatcgaccccgccacactctgggagtactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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