KEGG   Rattus norvegicus (rat): 683927
Entry
683927            CDS       T01003                                 
Symbol
Cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2
  KO
K14407  cleavage stimulation factor subunit 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    683927 (Cstf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    683927 (Cstf2)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     683927 (Cstf2)
    U7-dependent histone pre-mRNA processing factors
     683927 (Cstf2)
SSDB
Motif
Pfam: CSTF2_hinge RRM_1 CSTF_C RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 683927
NCBI-ProteinID: NP_001124486
RGD: 1596566
Ensembl: ENSRNOG00000048025
UniProt: B4F7F1
Position
X:101546809..101572760
AA seq 575 aa
MAGLPVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGESIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLISGNPQPVHVAGPGSGPNVSMNQQNPQAPQAQSLSGMHVN
GAPPMMQASMPGGVPAPVQMAAAVAGPGPGSLAPAGVMQAQVGMQGAGPVPMERGQVPMQ
DPRAAMQRGALPANVPTPRGLLGDAPNDPRGGTLMTVTGEVEPRAYLGPPPPPHQGPPMH
HVPGHEGRGPPPHDMRGGPLAEPRPLMAEPRGPMLDQRGPPLDARGGRDPRGLDARGMEA
RAMEARGLEARAMEARAMEARAMEARAMEARAMEARAMEARGMDTRGPVPGPRGPIPSGI
QGPNPMNMGAVVPQGSRQVPVMQGAGMQGASMQGGSQPGGFSPGQSQVTPQDHEKAALIM
QVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq 1728 nt   +upstreamnt  +downstreamnt
atggcgggtttgcctgttagagaccctgcggtggatcgttctctgcgttctgtattcgtg
gggaacattccttatgaagctactgaagaacaactgaaggacatcttctctgaggttggg
cctgttgttagtttcagattggtatacgatagggagacaggaaaaccaaagggttatggc
ttctgcgaataccaagaccaagagacagcacttagtgccatgcggaacttgaatgggcgt
gaattcagtgggagagcacttcgagtggacaatgctgccagtgaaaagaacaaagaggaa
ctgaagagccttggcactggtgcacctgtcatagagtcaccttatggagaaagcatcagc
cctgaggatgcccctgaatccattagcaaagctgttgccagtcttccgccagaacagatg
tttgaactgatgaaacaaatgaagctctgtgtccagaatagtccccaggaagcacgaaac
atgttgcttcagaacccacagctggcttatgctttgctgcaagcacaggtagtgatgaga
attgtggatcctgagattgccctgaaaattctgcaccgccagacaaatatcccaacgctg
atttcaggcaaccctcagccagtccatgttgccggacctggctcaggacccaatgtttca
atgaaccagcagaatcctcaggcccctcaggctcaatctttgagtggaatgcatgtcaat
ggcgcacctcctatgatgcaagcttctatgccaggtggagttccagcaccagtgcagatg
gcagctgctgtagcaggacctggccctggttccttagcccctgcaggagtcatgcaagcc
caagttggaatgcaaggagctggaccagtgcccatggaacgaggacaagtgccaatgcaa
gaccccagagcagctatgcagcggggagccttgcctgccaacgtcccaactcctcgtggt
cttttaggtgatgctcccaatgatccacggggaggcactttaatgaccgtaactggagaa
gtagaacctagagcttacctgggaccaccaccaccacctcatcagggcccaccgatgcac
cacgttcctggccatgaaggtcgtggaccaccaccgcatgacatgagaggaggaccgtta
gctgagcccagaccgttaatggcagagccaagaggacctatgctagatcagaggggtcca
ccgttggatgccagaggtggaagagatccccgaggattagatgcacgagggatggaggcc
agagccatggaagccagaggactggaagcccgtgccatggaagcccgtgccatggaagcc
cgtgccatggaagctcgtgccatggaggcccgagccatggaggctcgtgccatggaggcc
agaggcatggataccagaggcccagtacctggacctagaggacctatacctagtggaatc
caaggccccaatccaatgaacatgggggcagttgttccccagggatccagacaggtccca
gtcatgcagggagcaggcatgcaaggagcaagcatgcaaggtggaagccagcctggtggc
tttagtcctggacagagccaagtcacaccccaggatcatgagaaggctgctttgattatg
caggtccttcaactcactgcagaccagattgccatgctgcctcctgagcaaagacagagc
atcctaatcttaaaggaacagatacagaaatccaccggggcaccttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (23)   
   RefSeq(nuc) (21)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (51)   

Download RDF
DBGET integrated database retrieval system