KEGG   Rattus norvegicus (rat): 684189
Entry
684189            CDS       T01003                                 
Symbol
Trim68
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM68
  KO
K12033  tripartite motif-containing protein 68 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    684189 (Trim68)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     684189 (Trim68)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    684189 (Trim68)
SSDB
Motif
Pfam: SPRY PRY zf-C3HC4_4 zf-RING_UBOX zf-B_box zf-C3HC4 zf-C3HC4_3 zf-RING_5 zf-RING_2 zf-C3HC4_2 zf-RING_6 U-box zf-Nse zf-RING_10 TRAF3_RING zf-MIZ Prok-RING_4
Other DBs
NCBI-GeneID: 684189
NCBI-ProteinID: NP_001388433
RGD: 1593867
Ensembl: ENSRNOG00000047229
Vega: OTTRNOG00000002270
Position
1:complement(166525981..166539407)
AA seq 485 aa
MDPAVLVDAIVEEVNCPICMTLLREPVSITCGHTFCHSCLSGLWRLPGDSQNLSYTCPLC
RAPVQPRKLRPNWQLASVVDKVRLLGFCMEMGLKTDMCDLHKEQLTMFCKEDDVVTCKAC
NKSPEHGAHSVVPIKDVAWEYKWKLQQALEHLRKEQEKVWKLEVSEKEQAAIWKTQMETR
KQSILWEFEKYQQLLKEKELPCQQAEEEAAAVQAGLEQEKGEMGNKLRLRHEKMIQQSQV
LWQMIVELEERSQRPVRWMMQGIQEALNRSKSWSLQQLEPISLELKTDCRVLGLREILKT
FAVDVRLDPDTAYSRLVISKDRKSVHYGVTQQNLPDNPERFYRYNIVLGSQCISSGRHYW
EVEVGDRSEWGLGVCVESVDRKEVVYLSPRYGFWVIRLRKGTEYRAGTDEYPLLPLSVPP
HRVGIFLDYEAHDISFYNVTDAGSHIFTFPRYPFPGRLLPYFSPCYSIGTNNTTPITICT
LDGEG
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggatcctgcagtgttagtggatgccattgtggaagaagtgaactgtcctatctgtatg
accctcctcagggagcctgtgagcatcacctgtggccacactttctgccacagctgtctc
tctggactctggaggctcccaggagactcccagaacttgagctacacttgtcccctttgt
cgagctcccgtgcagccaaggaaactccgtcccaattggcagctggccagtgttgtagat
aaggtccgactgctaggcttctgtatggaaatgggactaaagactgatatgtgtgatctc
cacaaggaacagctcacaatgttctgcaaagaggatgatgtggtaacctgcaaggcctgt
aacaagtccccagagcatggagcccacagtgttgtccccataaaggatgttgcctgggag
tataagtggaaactccagcaagctctggaacatctgaggaaagaacaggagaaagtctgg
aaactggaagtcagtgagaaggagcaagctgccatctggaagacacagatggaaacacga
aagcagagcatcctatgggagtttgaaaaatatcagcagttgttaaaggaaaaggagctg
ccatgtcagcaggcagaagaagaggcagccgccgttcaggctggcctggagcaggagaag
ggagagatgggaaacaaactgaggttgaggcacgagaagatgatccagcagagccaggtc
ctgtggcagatgattgtggagctggaagagaggtcccagagacctgtgcgctggatgatg
cagggtattcaggaagccttaaacaggagcaagtcttggagcctgcagcagctagaacca
atctccttggagctgaagacagattgccgtgtgctaggactaagagagattctgaagaca
tttgcagtggatgtgcgcctagatccagacacagcttactcccgccttgtcatttccaag
gacaggaaaagtgtgcactatggagtcacccagcagaacctgcctgacaatcctgagaga
ttttaccgctacaacattgtcttgggcagccagtgcatctcctccggccggcactactgg
gaagtggaggttggagacagatctgagtggggcctgggagtgtgtgtagaaagtgtagac
cggaaagaggtggtctacttatcccctcgctatggcttctgggtgataaggctgaggaaa
ggaacagagtaccgagcaggcacagatgaatatccactcctgcccttgtcagttcctccg
caccgggtaggaatcttcctagactatgaggcccatgacatctccttctacaatgtgact
gatgctggctctcatattttcacttttcctcgctatcccttcccgggccgtctcctgccc
tatttcagtccttgttacagcattggcactaacaacaccactccaatcaccatttgtacc
ctggatggggaaggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (17)   
   Pfam (17)   
All databases (47)   

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