KEGG   Rattus norvegicus (rat): 685009
Entry
685009            CDS       T01003                                 
Symbol
Rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169 isoform X1
  KO
K20805  E3 ubiquitin-protein ligase RNF169 [EC:2.3.2.31]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    685009 (Rnf169)
   03400 DNA repair and recombination proteins [BR:rno03400]
    685009 (Rnf169)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     685009 (Rnf169)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    685009 (Rnf169)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     685009 (Rnf169)
SSDB
Motif
Pfam: zf-C3HC4_3 zf-C3HC4
Other DBs
NCBI-GeneID: 685009
NCBI-ProteinID: XP_001061888
RGD: 1583288
Ensembl: ENSRNOG00000026408
UniProt: F1LV79
Position
1:complement(163662582..163724154)
AA seq 694 aa
MAAAGPSTRASSAAGAAALSRRGRRGRCDEMAAAKAGAPGPASSPALLVLRPAPRPEESG
CTGCLETPGEVAALPCSHSRCRGCASRAAGPGCRRCGPRGSGWARRRARDDGQAAADLMG
ERARRGQPERCRPRRDGGAAASGPRPEPEPLAEPEFIFRTPIKLSKSGELGEEYGCLRKL
RGEKLQEEKTCEDQVHKILQEDSEVGKRKADEQKKREEPAVLKTGLEQCPARLSDSENEE
PSRGQMMQTHRSAFVSKNSSYSLAFLAGKLNTKVQRSQSCSDTIQDRVRSRLRTAPPSRA
KITTITPGSTPIIGVLLSTQNSRCLSAPDLTIEKRLPFSSLSSLASLHKPERSISPESND
SISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLSRSLQKQTSYEASPRILKK
WEQIFQERQIKKTLSKATLTSLAPEAGEELPGSEAIHSSKERPSLALSTRLSRVQVLSEC
AGPTSTALEYFPSVNQTKVEQDCVRKRSHEAPLETCHSSEHRGVASGPSLEGEQFEESRS
TVDATLVKTCISTVMKTTTVNSLLPKNDVLDGVLKTKKQLRTLSHFDLGNGILVNSLGEE
PTPSLRRGRKRRCKTKHLEQNGVKKLRPPSSDMGLAPKDPGLLEVGQKLQQEEEGQQLAL
QSQRMFDSERRTMSRRKGSVDQYLLRSSSLAGAK
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggcggcggcaggtccgagcactcgggcttcttccgcggcgggcgcggcagctctgagt
cggcggggccggcggggccgctgtgacgagatggcggcagcgaaagccggggctccgggc
ccggcctctagccccgcgttgttagtgttgcggccagcgccacggccggaggagtcgggc
tgcaccgggtgtctggagaccccgggggaagtggcggccctgccgtgcagccactcgcgg
tgccgaggctgcgcctctcgcgcggccggcccgggctgccgtcgctgcggtccccgcggc
tcgggctgggcccgccgtcgggcccgcgacgacggccaggccgccgcggatctgatgggc
gagcgcgcccgtcgcggacagccggagcgctgccgcccgcgccgggacgggggcgcggct
gcctcggggcccaggccggagccggagccgctcgcggagccagagtttatattccgaaca
ccaatcaagttaagcaagtcaggagaacttggtgaggaatatggatgcctgagaaagctg
agaggagagaagttacaagaagaaaaaacttgtgaagatcaggtgcacaagatactgcag
gaggattccgaagtggggaagaggaaagctgatgaacagaaaaagagagaggagccagcg
gtgctgaaaaccggtctggagcagtgtcctgcacgtctctcggattcagagaatgaagaa
ccttctcggggccagatgatgcagacccatcgctcagcctttgtttccaagaacagctct
tattccttagctttcctggcagggaagctaaacaccaaggtgcagagaagtcagagctgc
agtgacacaattcaggacagagtgaggagcaggctcaggacagctccacccagcagagcc
aagatcacaactataactccaggctccacccccatcattggtgttctcttgtctactcag
aacagccgctgcctctcagcccctgacttaaccatagaaaagcgcttgcccttcagctcc
ctttcatccttggcttccttgcataagccagagcgctctatcagccctgaaagcaatgac
agcatctctgaagagctaaaccacttcaagcccatcgtctgctcaccatgcactcctccc
aagagactccccgatggccgggtgctcagccctctcatcatcaagtctacgcctcgcaac
ctgagcagaagcctgcagaagcagacttcctatgaggccagtcctcgcatcctcaagaag
tgggagcagatcttccaggagcggcagatcaagaagacactttcaaaagccactctcacc
tccctggcccctgaggcaggggaagagttacccggttctgaagcaatccattccagcaag
gagaggccgtctctggctttaagcacaaggctgtcaagggtccaggtgctctcagagtgt
gctgggcccacctccactgccctggagtacttcccttctgttaaccagacaaaagtagaa
caggactgtgttagaaaaaggagccatgaggccccactggaaacctgccattcctcagag
cacagaggagtagccagtgggccttctttggaaggggagcagtttgaggagtcaaggtcc
actgtggatgccacattagtcaaaacttgcataagcacagtcatgaagaccacaacagtt
aattcactgctacctaaaaatgatgttttggatggggtcctcaaaacaaagaagcaactg
aggacactcagccattttgatctgggtaatggcattctggtcaacagcctaggagaggag
ccaaccccttccctgcgtagaggccggaaaaggcgctgtaagaccaagcacttggaacaa
aacggggttaaaaaactgcggccacccagcagtgacatgggcctggcccccaaagaccca
gggctgcttgaggtggggcagaaattgcagcaggaggaagagggccagcagctggctctg
cagtcacagcgcatgtttgacagtgagaggcggactatgagccggcgaaaaggcagcgtg
gatcaatatctcttgaggtccagcagcttggctggggccaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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