KEGG   Rattus norvegicus (rat): 685384
Entry
685384            CDS       T01003                                 
Symbol
Rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
  KO
K15708  E3 ubiquitin-protein ligase RNF180 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    685384 (Rnf180)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     685384 (Rnf180)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    685384 (Rnf180)
SSDB
Motif
Pfam: RNF180_C zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-RING_5
Other DBs
NCBI-GeneID: 685384
NCBI-ProteinID: NP_001128458
RGD: 1595064
Ensembl: ENSRNOG00000043329
UniProt: B5DEG2
Position
2:complement(38064026..38244854)
AA seq 592 aa
MRRSEESTGTQSSEEQTGALRCWRCRKCIASSGCFMSPLETQAVEDRHESVDAQNTCHLW
HMNAEALPEWISCLVQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLCKSRT
EHQATQAGRLTRPAPKCLPHPGVPSGCDKETLLTGGGSKTRSHRLLSMARNNNGLGRLTE
ALCLEVRATYFEMKNEKLLFKTSDPKCQPFVPQPDTGRCTSRASHRKSHSLDLNISEKLI
LLPTLYEIHSKPAAYPRVNETGPIDLSGLALPCSKSNCSFQNPPSFDPSMLLHRLSVAPH
ETQAQRGREFQCGLEASSVYSDHAHANSLPFLMDLPSAGRSMLEASDQEEHLSPLDFLRS
ASFPLGTINHRLNNRERNKLRTLRRQQRRRERWLQKQGKYSGVGLLDHMTLSNEMSTDDE
PEFTEEKDSYICAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRV
FLQTELNNATKTFFTKEYLKIKQSFQKSSSAKWPLPSCRKGFHLFGGFHRRAAPVTRRQF
PHGAHRMDYLHFEDDSRGWWFDMDMVIIYIYSVNWVIGFVVFCFLCYFFFPF
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgagaagaagtgaagagtcgacaggcacgcagagcagtgaggagcagacaggagccctt
cgttgctggagatgtagaaaatgcatcgcaagttctggttgcttcatgagtcctcttgag
actcaagcggttgaggacagacatgagtcagtcgacgcccaaaacacttgtcatctgtgg
cacatgaacgcagaagcccttccagaatggataagctgcctagtgcaaaaagcccagtgg
acagttgggaaactgaattgtcctttctgtggggcccgattagggggctttaattttgtc
agcactccaaaatgttcctgtggccagcttgcagctgtacatctctgcaagagccggact
gaacatcaagcgacacaggcaggcagactaacgagaccagcgccgaaatgtttgccacat
cccggggttccgtcaggttgtgacaaggaaactctgctgacaggtggtggctccaaaacg
agaagccacaggcttttaagcatggcccgaaacaataacggccttggaagactcacagaa
gcactctgcctggaggtgagagcgacgtattttgagatgaagaatgaaaaactgctcttc
aaaacatccgacccaaaatgccagccttttgttcctcagcctgacaccggcaggtgcact
tcaagagcttctcacagaaagtcacacagcttggacctgaacatcagtgagaagctgatt
ttattgcccactttgtatgagatccacagtaagcctgctgcctatcccagggtaaatgaa
acagggcccattgacctttcaggcttggctttaccatgtagtaaaagtaactgctccttt
caaaacccacccagctttgatcccagtatgctgctgcacagactgtcggtggccccccac
gagacccaggcacaaaggggaagagaattccagtgtggcctagaagcttcttcagtctac
tcagatcatgctcatgctaacagcctgccatttctgatggatctgccctcagcggggagg
agcatgctggaggcctcggaccaagaagaacacctctcccctctggacttccttcgctct
gccagcttccccttgggcaccattaaccacaggctgaacaacagagagaggaacaagttg
aggactctgagaaggcagcagcggcggcgtgagcgatggctacagaagcagggtaaatac
tcaggagtgggattgctggatcacatgaccttgagtaatgagatgagtacagatgatgag
cctgaattcacagaggaaaaggacagctacatctgtgcggtgtgcctggatgtgtacttc
aacccctacatgtgctacccctgccatcacatcttctgcgagccctgcctacgaactctg
gccaaagacaaccctgcaagcactccctgcccactgtgccggacaattatttctagagtc
tttctccagacagagctgaacaatgccacaaagacattctttactaaagaatatttgaaa
ataaaacagagcttccagaaatccagctctgcgaaatggcccttgccgagctgcagaaaa
ggattccatctctttggagggttccacaggcgcgcggccccagtgacgcggaggcagttc
ccacacggtgcccacaggatggactacctgcacttcgaggacgacagccgcgggtggtgg
tttgacatggatatggtgatcatctatatttattcagtgaactgggtcattggctttgtt
gttttctgcttcctttgctattttttctttccgttttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

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