KEGG   Rattus norvegicus (rat): 686179
Entry
686179            CDS       T01003                                 
Symbol
Ttc39c
Name
(RefSeq) tetratricopeptide repeat protein 39C isoform 2
  KO
K24943  tetratricopeptide repeat protein 39
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    686179 (Ttc39c)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Other domain-containing proteins
  Tetratricopeptide repeat-containing proteins
   686179 (Ttc39c)
SSDB
Motif
Pfam: Iml2-TPR_39 Cohesin_load TPR_2 TPR_1 VEFS-Box TPR_7
Other DBs
NCBI-GeneID: 686179
NCBI-ProteinID: NP_001402643
RGD: 1585423
Ensembl: ENSRNOG00000050949
Position
18:4043364..4162660
AA seq 580 aa
MAGSEQQRPRRREDGDPDAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRNHSPLMS
FGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDARKSTP
SMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYVDINALQELH
QKTLTEEPLSSDAANDNHIVAEGVTEEALSRLKGAVSFGYGLFHLCISMVPPNLLKIINL
LGFPGDRLQGLSSLTYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKGGLDEAKAI
LLRKESAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGWCS
MIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQLIFKEVQKLFKRKNN
QIEQFSVKKAERFRKQTPTRALCVLASIEVLYLWKALPNCSLPNLQRMSQACHEVDDSSV
VGLKHLLLGAIHKCLGNSQDAVQFFQRAAKDESCRQNNSYVQPYACYELGCLLLDRAETV
ARGRTLLLQAKEDFSGYDFENRLHVRVHAALASLRELVPQ
NT seq 1743 nt   +upstreamnt  +downstreamnt
atggccggctcggagcagcagcggccgcggcggagggaggacggcgacccggacgcggca
gcggcgcccctgcaggacgcggagctggccctggctggcatcaacatgcttctcaacaac
ggcttcagggagtcggatcagcttttcaaacaatacagaaatcatagcccactaatgagt
tttggagcgagcttcgtcagctttctgaacgccatgatgacattcgaggaggagaaaatg
cagttggcctgtgatgacttaaagactacggagaagctgtgtgaaagtgaagaggccgga
gtgatcgaaacgataaagaataaaattaagaagaacgttgatgcccggaaatccaccccc
tccatggtcgatcgacttcagaggcaaatcattattgccgactgccaggtgtacttggcc
gtgctgtcctttgtgaaacaagaattgtcggcctacataaaaggtgggtggatccttagg
aaggcctggaagatttacaataaatgctatgtggacatcaacgcccttcaggagctgcat
cagaagacgctgacagaagagcccttgtcttctgatgctgcgaatgataaccacattgtg
gcggaaggggtgactgaggaggccctaagcagactgaaaggtgctgtgagctttggatat
ggcctttttcacctttgcatatccatggtgcccccaaacctgctcaaaatcatcaacctg
ctgggctttcctggagaccgcctacagggcctttcttcactgacgtatgcgagcgaaagt
aaggacatgaaggcccctttagctacattagccctgctgtggtaccacactgtggtccgc
ccgttctttgccttggacggcagcgacaacaaagggggcctggatgaagctaaggcaatt
cttctcagaaaagagtctgcttacccaaactcttccctcttcatgtttttcaagggacgg
atccagcggttagagtgtcaaatcaacagtgccttgacttccttccacactgctctggaa
ctggctgtagaccagagagagatccagcatgtgtgtctgtatgaaatcggctggtgcagc
atgattgaactcaacttcaaggatgcatttgattcctttgagaggctgaagaacgagtcc
agatggtcccagtgctactacgcatatctaacagcagtttgtcaaggagccactggtgac
gtggatggggcacagctcatttttaaagaagtccagaagctattcaaaaggaaaaataac
cagattgaacagttctcagtgaaaaaggctgagcgatttcggaagcagaccccaaccagg
gcactgtgtgtgctggcatccattgaagttctgtacttgtggaaagcccttcccaactgt
tccctccccaacctgcagagaatgagtcaagcttgccatgaagtggatgattcatctgtt
gttggattgaagcatttgctccttggtgccatacacaaatgtctcggaaactcacaagat
gctgttcagttcttccagcgagctgctaaagacgagtcgtgccgtcagaataactcatac
gtccagccatatgcctgctatgagcttggctgtctcctgctagacagagcagagactgta
gcaagaggcagaacgctactccttcaggcaaaggaggatttttctggctacgactttgaa
aacagactgcacgtccgtgtccatgctgctctggcctctctaagggaactggtccctcag
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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