KEGG   Rattus norvegicus (rat): 686412
Entry
686412            CDS       T01003                                 
Symbol
Sall4
Name
(RefSeq) spalt-like transcription factor 4
  KO
K19871  sal-like protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    686412 (Sall4)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    686412 (Sall4)
SSDB
Motif
Pfam: zf-C2H2 zf-H2C2_2 zf-C2H2_4 zf-C2H2_jaz zf-met TDBD zf-Di19 zf-C2H2_6 DUF2225 zf-C2H2_11 UBZ_FAAP20
Other DBs
NCBI-GeneID: 686412
NCBI-ProteinID: NP_001414424
RGD: 1597672
Ensembl: ENSRNOG00000050035
Position
3:complement(177891705..177909743)
AA seq 1070 aa
MSRRKQAKPQHINSEEGQGEQPLQQPSPGLAEAPAAEEPGVPVNSSGNGDEASEDPAPAP
VKRSRREDTHICNKCCAEFFSLSEFMEHKKSCTKNPPVLIMNDSEGAVPPEDFSRAVLGS
PSNKDGLQENGGSSSGDLKENLGTDSILYLKTEATQPPAPQDISYLPKGKVANTNVTLQA
LRGTKVAVNQRSTDVPAAPVPAALSIPWILEQILCLQQQQLQQIQLTEQIRVQVNMWAAH
ALHSGVAGADTLKALSNHVSQQVSVSQQVSAAVALLSQKASNPTLSLDALKQAKLPHAAV
PSTASSLSSGFTPFALKPDGTRVLPNFMSRLPNALLPQTPGSVLLQSPFSTVTLDQSKKG
KGKPQNLSASMLDAKTKDEVVLGKHKCRYCSKVFGTDSSLQIHLRSHTGERPYVCPVCGH
RFTTKGNLKVHFHRHPQVKANPQLFATEFQDKGASSTSPHYALPVPIPVDESSLSVDTEP
VPVTGTPSIGLPQKLTSGPNPKDLMGGSLPNDIQPGPSPESEVGLPLLGAGMMRNPPRAG
GFQGTGAPESGSETLKLQQLVENIDKATTDPNECLICHRVLSCQSSLKMHYRTHTGERPF
QCKICGRAFSTKGNLKTHLGVHRTNMAVKTQHSCPICQKKFTNAVMLQQHIRMHMGGQIP
NTPLPESPCDFTVPEPMAVSENGGGSGVCQEDAVEGMEAEEACIQDVPGGPSTVSAPLPG
THLASPSLGFPVMAPLDAQGRGALPALALQRQSSRESGSLEAGDSCLTNDSSSLMGDQEC
PSRSPDATETMCYQAVSPANSQAGSVKSRSPDGHKAEGVESCRVDTEGRTSLPSTFIRAQ
PTFVKVEVPGSFVGPPSVPSGMTPLLASQQPPRRQAKQHSCTRCGKNFSSASALQIHERT
HTGEKPFVCNICARAFTTKGNLKVHYMTHGTNNNSARRGRKLAIENTMAALGAEGKRAPE
VFPKELLSPTVSVDPATWNQYTSVLNGGLAMKTNEISVIQSGGIPTLPVSLGASSVVSNP
TLSKLDGSQTGGSGAMSGAMSGNLEKPGVPDGVAKHQFPHFLEENKIAVS
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgtcgaggcgcaagcaggcgaagccccagcacatcaactcggaggagggccagggcgag
cagccgctgcagcaaccgagccctggcctcgcagaggcgccggcggcggaggaacccggt
gttccagtgaattcctcagggaacggagatgaagcctcggaggaccccgcccccgccccg
gtgaagcggtcccgacgggaggatactcacatctgtaacaagtgctgtgcggagttcttc
agtctctctgagttcatggaacacaagaaaagttgcactaagaaccctcctgtcctcatc
atgaatgacagcgagggggctgtgcctccagaggacttttccagagctgtcctgggcagc
ccaagcaataaagatggtctccaggagaatggcggcagcagctcgggggacttgaaggag
aacctaggcacggactccatcctgtacttgaagacagaggcgacccagccacccgcaccc
caggacataagctatttgcccaaaggcaaagtagccaacaccaatgtgactctgcaagcg
ctccgtggcaccaaggtggcagtgaaccagcggagcaccgatgtccccgcggcccccgtg
cctgccgctctcagcatcccttggatcctggagcagatcttgtgcctgcagcagcagcag
ctccagcagatccagctaacggaacagatcagagtccaggtgaacatgtgggccgcgcat
gccctccactctggcgtggcaggcgcggacactctcaaggccttaagcaaccacgtgtct
cagcaggtctctgtctcccagcaggtgtctgctgctgtggccctgcttagccagaaagcc
tccaacccaactctgtctctagatgccttgaaacaagccaagctacctcatgccgctgtc
ccctccacggccagctcattgtcctcggggttcacacccttcgccttgaagccggacggg
actcgagttctccccaacttcatgtcccgcctcccgaatgccctgctacctcagaccccg
ggctctgtgctcctgcagagtcccttctctactgtgacactggaccagtccaagaaagga
aaggggaaaccccaaaacctctccgcctccatgttagatgccaagaccaaggacgaggtt
gtcctcggtaagcacaagtgtaggtactgtagtaaggttttcgggaccgatagctccctt
cagattcatcttcgctcccacaccggagagagaccttacgtgtgccctgtctgtggtcac
cgcttcaccaccaagggcaacctcaaggtccacttccatcgacaccctcaggtgaaggcg
aacccccagctgtttgccactgaattccaggacaaaggggcatcaagcaccagtcctcac
tatgcactccctgtccccatccctgtagacgagtcaagtctctctgtagacactgagcct
gtcccggtcacgggaaccccttccatagggctacctcagaagctcacttcagggcctaac
cccaaggacctcatgggcggctccttgcccaacgacatacagccagggccttctccagaa
agcgaggtgggccttccactcctcggggcggggatgatgcgtaatcccccaagggctggg
ggcttccagggcactggagccccagagtcagggtcagagaccctgaagttacagcagcta
gtggagaacatagacaaggccaccaccgaccccaacgagtgtctcatttgtcatcgggtc
ctcagctgtcagagttcccttaagatgcattaccgtacccacacaggagagagaccattc
caatgcaagatctgtggccgggccttctccaccaaaggcaacctgaagacacatcttggg
gttcaccgaacaaacatggccgtaaagacccagcattcgtgccccatctgccagaagaag
ttcaccaatgccgtcatgttacagcagcatatccggatgcacatgggtggccagatcccc
aacacgcctctgcccgagagtccctgcgacttcacagttcccgagcccatggccgtcagt
gagaacggcggtggcagcggtgtctgccaggaagacgcggtagaagggatggaagcggag
gaggcttgtatccaggatgttcccggtggcccctcgacggtctccgcgccgctccccgga
acccatctggcgtcgccctccctgggctttccggtgatggctcccctggatgctcagggg
agaggggctcttcctgctttggccttgcaacggcagagcagtcgagaaagcggctctctg
gaggccggtgacagttgcctgaccaatgactcttcctcgctcatgggtgaccaggagtgt
ccgagccggagcccagatgccacggagaccatgtgctaccaggcagtgtcccctgccaat
agccaagctggaagtgtcaagtcccggtctcccgacggtcacaaggccgagggtgtcgag
agctgccgcgtggacaccgaaggccgtaccagcctcccctcgacatttatccgagcacag
cccacctttgtcaaagttgaagtacctggctcctttgtgggacccccgagcgtgccctca
ggcatgacgcctctgctagcttcccagcagccgccgcgccgccaggccaagcaacactct
tgcacccggtgcgggaagaacttctcgtccgccagtgccctgcagatccacgagcgaacg
cacacgggagaaaagcctttcgtgtgtaacatatgtgctcgggccttcaccacgaaaggc
aacctgaaggtacactacatgactcatgggaccaacaataactccgcccgccgaggcagg
aagctggccatagagaataccatggccgccctgggtgctgagggaaagagagcacctgag
gtgtttcccaaggagctcctgtcccccacggtgagtgtggaccctgccacgtggaaccag
tacaccagtgtcctcaatgggggtctggccatgaagaccaatgagatctctgtgatccag
agtggagggatccccaccctgcctgtgtctctgggggccagctccgtggtgagcaacccc
acgctttctaagctggatggctcccagaccggcgggagcggggccatgagtggggccatg
agcgggaacctagagaagcctggcgttcccgatggggtggccaaacaccagtttcctcat
tttctggaggaaaataagatcgcagtcagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

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