KEGG   Rattus norvegicus (rat): 687575
Entry
687575            CDS       T01003                                 
Symbol
U2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    687575 (U2af1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    687575 (U2af1)
Spliceosome [BR:rno03041]
 Complex A
  U2 snRNP components
   U2 related factors
    687575 (U2af1)
 Complex B
    687575 (U2af1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 687575
NCBI-ProteinID: NP_001037756
RGD: 1584190
Ensembl: ENSRNOG00000045860
UniProt: M0RBR0 Q3KR55
Position
20:complement(9744206..9755146)
AA seq 239 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGRERDRRRSRDRERSGRF
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcggaatacttggcctccatcttcggcaccgagaaagacaaagtcaactgttcattt
tatttcaaaattggagcgtgtcgtcatggagacagatgttctcggttgcacaataaaccg
acctttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgcggtgagcgacgtggagatgcaggagcactatgacgag
ttctttgaggaagtcttcactgagatggaagagaagtacggggaggtcgaggagatgaac
gtctgtgacaacctaggagaccacctggtggggaatgtgtatgtcaagttccgacgtgag
gaggatgcggagaaagcagtgatcgacttgaacaaccgctggtttaatgggcagccaatc
cacgcagagctgtccccagtaactgacttcagggaagcttgctgccgccagtatgaaatg
ggggagtgcacaagagggggcttctgcaacttcatgcatctgaagccgatctcaagagag
ctgcgacgggagctgtatgggcgccggcgcaagaagcatagatccaggtcccgatccagg
gagcggcgttcccgatcgagagaccgtggacgcggtggtggaggtggaggtggaggcggt
ggaggacgtgagcgtgacaggaggcggtcaagagaccgggagagatctgggcgattctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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