KEGG   Rattus norvegicus (rat): 687696
Entry
687696            CDS       T01003                                 
Symbol
Stambpl1
Name
(RefSeq) AMSH-like protease
  KO
K11867  AMSH-like protease [EC:3.4.19.12]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    687696 (Stambpl1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    687696 (Stambpl1)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     687696 (Stambpl1)
Peptidases and inhibitors [BR:rno01002]
 Metallo peptidases
  Family M67
   687696 (Stambpl1)
Ubiquitin system [BR:rno04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    687696 (Stambpl1)
SSDB
Motif
Pfam: USP8_dimer JAB Prok-JAB
Other DBs
NCBI-GeneID: 687696
NCBI-ProteinID: NP_001108520
RGD: 1583011
Ensembl: ENSRNOG00000050224
UniProt: B0BMZ5
Position
1:241095695..241158225
AA seq 436 aa
MEQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNISINEDITPRRYFRSGVEMER
MASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
LKTDLLRKYNIEYQEYLQSKNKYKAEILKKLEHQRLIEAERQRIAQMRQQQLESEQFLFF
EDQLKKQELARGQTRGQDSLVLSEQTDGSGLSCFSTHQNNSLRNVFADHPQKSDVCDLAN
YSPPVNRALKPAATLSAVQNLVVEGLRCVVLSRDLCHKFLLLADSNTVRGIETCGILCGK
LTHNEFTITHVVVPKQSAGPDYCDVENVEELFSVQDQHGLLTLGWIHTHPTQTAFLSSVD
LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSTCKKKGFHPHTKDPKLFSIC
SHVLVKDIKTTVLDLR
NT seq 1311 nt   +upstreamnt  +downstreamnt
atggagcagccatttacggtgaattcactgaaaaagttagctgctatgcctgaccataca
gatgtttctctaagtccagaggagcgggtccgtgccctaagcaagcttggttgtaatatc
tccattaatgaagacatcaccccacgccgttacttcaggtccggagtggaaatggaaaga
atggcgtctgtgtatttggaagaagggaacctggaaaatgcctttgttctttacaacaaa
tttataacattatttgtagaaaaacttcccagccatcgagattaccagcagtgtgcagtt
cccgagaagcaggacatcatgaagaaactgaaggagattgcgttcccaaggacggacgaa
ttgaaaacggacctgctaaggaaatataacatagaataccaagagtatttacaaagtaaa
aacaaatataaagccgaaattctcaaaaagttggaacatcagagactgatagaggcagag
cgccagcgaatcgctcagatgcgccagcagcagctggagtctgaacagttcctgtttttc
gaagatcaactcaagaagcaggagttggctcggggccagactcgaggtcaggactctctg
gtgctgtctgagcagactgacggaagtgggctgtcctgtttttccacccaccagaacaat
tcactgaggaacgtatttgcagaccatcctcagaaaagtgatgtttgcgatctcgctaac
tactctcctccagtgaacagggccctaaagccagcggccaccctgagtgctgttcagaat
ttagtggttgaaggactgaggtgtgtagttttgtcaagagatctttgccacaaatttctg
ctgctggctgactctaacacagtgagaggaatagaaacctgtgggatcctctgtggaaaa
ctgacacataatgaattcaccattactcatgtggtggtgccaaagcagtctgctggccca
gactattgcgacgtggagaatgtagaagaattattcagtgttcaggatcaacatggtctc
ctcacgctgggatggattcacacacaccccacgcaaacggcattcctgtccagtgtggat
ctccacactcactgctcctatcagcttatgttgccagaggccattgccatcgtgtgttcc
ccaaagcataaagacaccggcattttcaggctcaccaacgctggcatgcttgaggtttct
acttgcaagaagaagggtttccatcctcacaccaaggaccccaagctgttcagtatatgc
agccatgtgttagtgaaagacataaagacaactgtgttggacctgaggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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