KEGG   Rattus norvegicus (rat): 687711
Entry
687711            CDS       T01003                                 
Symbol
Snrpd3
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
rno05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    687711 (Snrpd3)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    687711 (Snrpd3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    687711 (Snrpd3)
   03041 Spliceosome [BR:rno03041]
    687711 (Snrpd3)
   03032 DNA replication proteins [BR:rno03032]
    687711 (Snrpd3)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     687711 (Snrpd3)
Spliceosome [BR:rno03041]
 Complex A
  U1 snRNP components
   Sm proteins
    687711 (Snrpd3)
  U2 snRNP components
    687711 (Snrpd3)
 Complex B
  U1 snRNP components
    687711 (Snrpd3)
  U4/U6.U5 tri-snRNP components
    687711 (Snrpd3)
 Complex C
  U2 snRNP components
    687711 (Snrpd3)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     687711 (Snrpd3)
SSDB
Motif
Pfam: LSM Kringle
Other DBs
NCBI-GeneID: 687711
NCBI-ProteinID: NP_001386467
RGD: 1597573
Ensembl: ENSRNOG00000050410
Position
20:complement(13129555..13145100)
AA seq 126 aa
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGMGRGN
IFQKRR
NT seq 381 nt   +upstreamnt  +downstreamnt
atgtctatcggtgtgccaattaaagtcctgcacgaagcggaaggccacatagtgacatgt
gagaccaacactggtgaagtgtatcgggggaagctcattgaggcagaggacaacatgaac
tgccagatgtccaacatcacagtcacatacagagacggccgagtggcacagctggaacag
gtgtacatacgtggcagcaagatccggtttctgattttgcctgacatgctgaaaaatgca
cccatgttaaagagcatgaaaaataaaaaccaaggctcaggggctggccgaggaaaagct
gctatcctgaaggcccaagtggctgcaagaggaagaggacgtggaatggggcgtggaaac
attttccagaagcgaagatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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