KEGG   Rattus norvegicus (rat): 688333
Entry
688333            CDS       T01003                                 
Symbol
Ptchd3
Name
(RefSeq) patched domain-containing protein 3
  KO
K24682  patched domain-containing protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    688333 (Ptchd3)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Other domain-containing proteins
  Patched domain-containing proteins
   688333 (Ptchd3)
SSDB
Motif
Pfam: Patched Sterol-sensing MMPL
Other DBs
NCBI-GeneID: 688333
NCBI-ProteinID: NP_001395857
RGD: 1590039
Ensembl: ENSRNOG00000046946
Position
10:107594881..107606842
AA seq 905 aa
MISSKVAPGEEEEQQEAPAEVAPAEEELRETEGQLEAVPPDEASPSWATGPPLERLPPVG
QEAPPPRRCHTDCLEAPLSSCFLRLGALVGANPWLFLLGPVLLTASLGTGLIFLPKEKEN
LEEQYTPIGSPAKAERRFVQSHFSTNDSYRFSASRTSSETNFASILVVSHRDSLLEPEAF
AEVSRLDRAVQALKVVQENGTQILYPEVCAKYSVGCVPPNPLLFSWQQNSSLNLSELTFP
IHSVADHLIHLAGFFGGNVLGYATTGNRQRLVESRAMRLLYYLKTEDPEDRERSQAWLTH
FLDHFNDMKSDLALEDIEVVYFTSLSRQLEFEATSKTVIPLFHLAYILIILFAVVSCSRL
DCIRNKMWVAVFGVFSVAMSVVSGFGLMLHIGVPFVIIVANSPFLILGVGVDDMFIMISA
WQKTSLTESVSERLSNSYSKVAVSITITTITNVLAFYTGITSSFRSVQYFCIYTGTTLLF
CYFYSITCFGAIMALDGKREVVWSRWLEKPDQKYSSFKKFCCVPFGSFPDEHGDDNHPMN
LFFRDYFGPFLTTSKAKFIVVLIYIFYIISSIYGCFQVQEGLDLRNLASDDSYITPYFNV
EEDYFSDYGPRVMVIVTETVNYWDKDVRQKLDKCMTQFEQNEYVDKNLTEFWLEAYMQYM
NNTGNNPNDKNTFMNNIAGFLNFFPVFTYDINVSSSNEITSSRGFIQTIDVSSSSNKKRM
LLKLRGIAENCEVPLMVYNQAFIYFDQYAAIIENTVRNVMIASTAMFIVSLLLIPHPVCS
LWVTFAIASVIVGVTGFMAFWNVNLDSISMINLVICIGFSFDFSAHISYAFVSSNEPSVN
KKSIEALYLLGYPVLQSAISTIIGVCVLAAAKAYIFRTFFKIMFLVMFFGAAHGLIFIPV
FLTFF
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgatctcctccaaggtggcaccaggagaggaggaggagcagcaggaggcaccggccgag
gtggcgccggctgaggaggagctgcgggagacggaaggacaactggaagccgtccctccg
gacgaggcgagcccaagctgggccaccgggccgccgttggagcgcctgccgcccgtgggt
caggaggccccgccgccgcgccgctgccacaccgactgcctggaagccccgctgtccagc
tgcttccttcgcctcggcgccctcgtgggcgcgaacccatggctgttcctgctcgggcct
gtgctgctgacggcgtcgctgggcaccggcctcatcttcctcccgaaggagaaggagaac
ctcgaggagcagtacacgccgatcggcagcccggccaaggccgagcggcgcttcgtgcag
agccacttcagcaccaacgactcgtaccgcttctccgcctccaggaccagctccgagacc
aacttcgcgtccatcttggtggtgtcccacagagactcgctgctggagccggaagccttc
gcggaggtgagcaggctggaccgagcggtgcaggcgctgaaagtcgtccaggagaacggg
acgcagatcctgtacccggaggtgtgcgccaagtacagcgtcgggtgcgtcccgcccaac
cctctgctcttctcgtggcagcagaactcgtcgctgaacctgtcggaactcaccttcccc
atacacagcgtggccgaccacctcatccacctcgcgggcttcttcgggggaaacgtcctg
ggctacgcgacgaccggaaaccgccagcggctggtggagtcgcgggcgatgcggctgctg
tattacctcaagacggaggaccccgaggaccgcgagcgcagccaggcgtggctgactcac
ttcctcgaccattttaacgacatgaagagcgacctggctctggaagacatagaggtggtc
tactttacatccctttccagacagttggagtttgaggcaacctccaagactgtgattcct
ctgtttcacttggcatacattttaatcatactatttgcagttgtatcatgctccaggttg
gactgtataagaaacaaaatgtgggttgcagtctttggagtgttttctgtcgccatgtca
gtggtgagtggctttggcctgatgctgcacattggggtcccatttgtgatcatagttgca
aactcaccatttcttattcttggtgttggagttgatgacatgtttatcatgatttctgcc
tggcagaagaccagcctcacggagagcgtaagcgaacgactctccaattcttactcaaag
gtggcagtgtccattacaatcaccaccatcaccaatgtccttgctttctatacgggaatc
accagctctttcagatccgtgcagtatttttgtatctatacgggaacaaccctgctcttc
tgctatttttatagcatcacctgttttggagcaattatggctctggatggtaaaagagaa
gttgtgtggtcgcgctggctggaaaagccagaccaaaaatattcctcatttaaaaagttc
tgctgtgtcccattcggttcgtttccagatgaacacggagatgataaccatcccatgaat
ttgttctttagagactattttggtccttttctcacaacttccaaagccaagtttattgtg
gtgctaatatacattttctacatcatcagcagtatatatgggtgcttccaagtgcaagaa
gggttagatcttcgcaacctggcaagtgatgattcctatatcacaccctactttaatgtc
gaggaagactacttttcagattatggtccaagagttatggtcattgttacagaaactgtc
aactactgggataaagatgtaagacagaaactggacaaatgtatgacacaatttgaacaa
aatgagtatgtagataaaaatctcacagagttttggttggaggcatatatgcagtatatg
aataacactggaaataatcctaatgacaagaatacctttatgaataatattgcaggcttt
ttaaactttttccctgtttttacatatgatattaatgtctcctcatcaaatgaaatcact
tcttcacgaggctttatccaaaccatagatgtttcatcctctagcaataagaaaagaatg
ttactaaagttgcgaggcatagctgaaaactgtgaggttcccttgatggtatataaccag
gcattcatctattttgatcagtatgctgcgataatagagaatactgttcgaaatgtcatg
attgcatcaacagctatgttcatcgtttccttactgctgatccctcacccagtgtgttcc
ctgtgggtcacctttgctattgcttctgtgattgtgggagtgacaggttttatggcattc
tggaatgttaatcttgattccatatccatgattaatcttgttatttgtatagggttttct
tttgatttttctgcacacatctcctatgcatttgtttccagtaatgagccttcagtcaac
aagaagtctattgaggcattatacttgttaggttacccagtgttgcaaagtgcaatttca
acgataataggggtgtgtgttttggctgcagctaaagcctacatcttcagaacttttttt
aagattatgtttcttgttatgtttttcggggctgcccatggcctaatttttattccagta
ttcttaacctttttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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