KEGG   Rattus norvegicus (rat): 688699
Entry
688699            CDS       T01003                                 
Symbol
Prdm12
Name
(RefSeq) PR domain zinc finger protein 12
  KO
K24255  PR domain zinc finger protein 12 [EC:2.1.1.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    688699 (Prdm12)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     688699 (Prdm12)
SSDB
Motif
Pfam: PRDM2_PR zf-H2C2_2 zf-C2H2 zf-C2H2_4 SET zf-C2H2_jaz zf-met zf-C2H2_2 zf-C2H2_6 zf-Di19 zf-BED CBM_3 Elf1
Other DBs
NCBI-GeneID: 688699
NCBI-ProteinID: NP_001414289
RGD: 1586401
Ensembl: ENSRNOG00000009218
Position
3:35322962..35341878
AA seq 365 aa
MMGSVLPAEALVLKTGLKAPGLALAEVITSDILHSFLYGRWRNVLGEQLLEDKSHHASPK
TAFTAEVLAQSFSGEVQKLSSLVLPVEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGR
VIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQI
GTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIPGVPGLEEEQKKNKHEDFHPADSATGTA
GRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYK
CQVCQSAYSQLAGLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAHHL
PAMVL
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgatgggctctgtgctcccagctgaggccctggtgctcaaaacagggctgaaggctccg
gggctagcgttggcagaggtcatcacctccgacatcctgcacagtttcttatatggccga
tggcgcaacgtgctaggcgaacagctgctcgaggacaagagccaccatgccagcccaaag
actgccttcaccgccgaggtcttggcacagtccttctcgggagaggtgcagaagctatct
agcctggtgctgccggtggaagtgatcatcgcccagagttccatccctggcgagggcctt
ggcatcttctccaagacgtggatcaaggcaggcacggagatgggccccttcactggccga
gtcatcgccccagagcatgtggatatctgcaaaaacaacaacctgatgtgggaggtattc
aacgaggatgggacagtccgctactttatcgatgccagccaggaagaccaccgaagctgg
atgacctacatcaagtgtgcccggaacgagcaggagcagaacctggaggtggtgcagata
ggcactagcatcttctacaaggccatagagatgatccctccagaccaggagctgctggtg
tggtatgggaattcccacaacacctttctggggatcccaggtgtgccgggactggaagaa
gaacagaagaaaaacaagcatgaggacttccacccggccgactccgcgaccggtaccgcg
ggccgcatgcgctgcgtcatctgccaccgcggcttcaactcgcgcagcaacctgcgctcg
cacatgcgtatccacacgctggacaagcccttcgtgtgccgcttctgcaaccgccgcttc
agccagtcgtccacgctgcgcaaccacgtgcgcctgcacacgggcgagcgtccctacaag
tgccaggtgtgccagagcgcttattcgcagctggccggcctgcgcgcgcaccagaagagc
gcgcgccaccggccacccagcaccgcgctgcaggcgcactcgcccgcgctacccgcgcct
cacgctcacgcgcctgcgctcgccgccgcggccgccgctgccgccgcggcgcatcacctg
ccagccatggtgctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (13)   
   Pfam (13)   
All databases (27)   

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