KEGG   Rattus norvegicus (rat): 689030
Entry
689030            CDS       T01003                                 
Symbol
Tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
rno05016  Huntington disease
rno05017  Spinocerebellar ataxia
rno05165  Human papillomavirus infection
rno05166  Human T-cell leukemia virus 1 infection
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    689030 (Tbpl1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    689030 (Tbpl1)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    689030 (Tbpl1)
   05165 Human papillomavirus infection
    689030 (Tbpl1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    689030 (Tbpl1)
   05017 Spinocerebellar ataxia
    689030 (Tbpl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    689030 (Tbpl1)
   03021 Transcription machinery [BR:rno03021]
    689030 (Tbpl1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    689030 (Tbpl1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     689030 (Tbpl1)
  RNA polymerase III system
    TFIIIB
     689030 (Tbpl1)
  RNA polymerase I system
    SL1/TIF-1B
     689030 (Tbpl1)
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 689030
NCBI-ProteinID: NP_001120673
RGD: 1597456
Ensembl: ENSRNOG00000066988
UniProt: A0A8I6A122
Position
1:24597028..24622445
AA seq 186 aa
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKIICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIYPFVFE
SRKEIL
NT seq 561 nt   +upstreamnt  +downstreamnt
atggatgcagacagtgatgttgcattggacattttaattacaaatgtagtctgtgttttt
agaacaagatgccatttgaacttaaggaagattgctttggagggagcaaatgtaatttat
aagcgtgatgttgggaaagtattaatgaagcttagaaaacctagaattacagctacaatt
tggtcctcaggaaaaattatttgcactggagcaacgagtgaagaagaagctaaatttggt
gccagacgtttagcccgtagtctgcagaaactaggttttcaggtaatttttacagatttt
aaggttgtgaatgttttggcagtctgtaacatgccctttgaaatccgtttgccagaattc
acaaagaacaacagacctcatgccagctatgaacctgaacttcatcctgctgtgtgctat
cggataaagtctctaagagctacgttacagatattttcaacaggaagtatcacggtgaca
gggcccaatgtaaaggctgtggccacagccgtggagcagatctacccattcgtgtttgaa
agcaggaaggagattttgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (18)   
   UniProt (1)   
   RefSeq(pep) (17)   
DNA sequence (31)   
   RefSeq(nuc) (17)   
   GenBank (7)   
   EMBL (7)   
Protein domain (2)   
   Pfam (2)   
All databases (67)   

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