KEGG   Rattus norvegicus (rat): 689116
Entry
689116            CDS       T01003                                 
Symbol
Ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno03015  mRNA surveillance pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    689116 (Ncbp2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    689116 (Ncbp2)
   03015 mRNA surveillance pathway
    689116 (Ncbp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    689116 (Ncbp2)
   03041 Spliceosome [BR:rno03041]
    689116 (Ncbp2)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     689116 (Ncbp2)
Spliceosome [BR:rno03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    689116 (Ncbp2)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_5
Other DBs
NCBI-GeneID: 689116
NCBI-ProteinID: NP_001102995
RGD: 1596188
UniProt: B1WC40 A6IRU9
Position
11:complement(82326002..82334839)
AA seq 156 aa
MSGGLLKALRSDSYVELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELF
SKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFK
EGRQYGRGRSGGQVRDEYREDYDAGRGGYGKLAQKQ
NT seq 471 nt   +upstreamnt  +downstreamnt
atgtcgggtggcctcctgaaggcgctgcgcagtgactcctacgtggagctcagcgaatac
cgggaccaacacttccggggtgacaatgaagaacaggaaaagttactgaagaagagctgt
acgttgtatgttgggaatctttccttttatacaacagaagaacagatttatgagctcttc
agcaaaagtggggacataaagaagatcatcatgggtctggacaagatgaagaaaacagcg
tgtgggttctgtttcgtggaatactattcaagagcagatgcagagaacgcaatgcggtac
ataaacggaacgcgtctggatgaccggatcatacggacagactgggatgcaggctttaag
gagggcaggcagtatggacgtggacggtctgggggtcaggtccgggatgagtatcgggag
gactacgatgctggaagaggcggctatggaaaactggcacaaaaacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system