KEGG   Rattus norvegicus (rat): 689704
Entry
689704            CDS       T01003                                 
Symbol
Vsx1
Name
(RefSeq) visual system homeobox 1
  KO
K09335  visual system homeobox protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    689704 (Vsx1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    689704 (Vsx1)
SSDB
Motif
Pfam: Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 689704
NCBI-ProteinID: NP_001103016
RGD: 1305667
Ensembl: ENSRNOG00000042220
UniProt: D3ZQZ0 A6KHF7
Position
3:complement(159974693..159982292)
AA seq 369 aa
MTGRDGLLDGRSRSRALAPGCPPTGSRLRSFAINDLLGLEADLPTPAEPGLRSNCEAPAE
ATGPGPGPGLCGTCPARGALPLGLGLLCGFGAQPPSATAARARCLLLADLRLLPPAGPEP
AVAQSPVHPPPALGSQQRSENISTSDGDSPSEEKNDPKMSLTLGKRKKRRHRTVFTAHQL
EELEKAFGEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYG
LYGAMVRHCIPLPDSVLNSADSLQGSCAPWLLGMHKKSTEMRKPESEEKLAGLWELDHLR
KGAKKDEDGPERGPGKASLNPEGSLEDVAIDLSSSSRQETKKMPSGSSTQGCTHAPGPQV
LQPPQVGAS
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgacgggccgggatgggcttttggatgggcgttccaggagtagagccctggcgccaggc
tgtccccccaccggctctcgccttcgaagcttcgccatcaacgacctgctgggattggag
gcagacctgccgactccagcggagcctgggctaagatccaactgtgaagctccagcggag
gcaacagggccaggaccggggccgggactctgcggcacctgccctgctcgcggagctctc
ccgctgggcctgggcctcctctgcggcttcggggcacagcccccttccgcgaccgccgct
cgcgcacgctgcctactgctcgccgatctgcggcttctgccgcctgcaggacccgagcct
gctgtcgcccagagcccggtccacccgccgcctgcgctcggcagccagcagcgcagtgag
aacatctccacgtcggatggggacagtccatctgaagaaaagaatgacccgaagatgtcc
cttaccctgggcaagaggaagaagcggagacacaggacggttttcactgcccatcaacta
gaagaactggagaaggcgtttggcgaggcccactaccctgatgtgtatgctcgggagatg
ctggctgtgaaaacagagctcccggaagaccggatacaggtctggttccagaaccggagg
gccaagtggcggaagcgagagaagcgctggggtggcagcagtgtgatggctgagtacggg
ctctacggagccatggtgcgtcactgcattccgttgccggactccgtgctcaactctgca
gacagcctgcagggctcctgtgcaccctggcttctggggatgcataaaaagtctacagag
atgaggaaacctgaaagtgaagagaagttggcaggactctgggagttggaccatctcaga
aagggtgctaagaaggatgaggatggacctgagaggggaccaggcaaagcgagcctgaac
cctgagggcagcttggaagatgtggccattgacctgtccagctcttccaggcaggagact
aagaaaatgccctcagggtccagtactcagggatgtacccacgccccagggccgcaggtg
ctccagcccccacaggtgggagcctcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system