KEGG   Rattus norvegicus (rat): 689890
Entry
689890            CDS       T01003                                 
Symbol
Srsf1
Name
(RefSeq) serine/arginine-rich splicing factor 1
  KO
K12890  serine/arginine-rich splicing factor 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
rno04657  IL-17 signaling pathway
rno05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    689890 (Srsf1)
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    689890 (Srsf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    689890 (Srsf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    689890 (Srsf1)
Spliceosome [BR:rno03041]
 Common components
  Common spliceosomal components
   SR proteins
    689890 (Srsf1)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_3 RRM_7 Nup35_RRM_2 DDE_Tnp_1 CoV_nucleocap
Other DBs
NCBI-GeneID: 689890
NCBI-ProteinID: NP_001103022
RGD: 1587490
Ensembl: ENSRNOG00000050323
UniProt: D4A9L2 A6HHW7
Position
10:73335519..73342549
AA seq 248 aa
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
HSRSRSRT
NT seq 747 nt   +upstreamnt  +downstreamnt
atgtcaggaggtggtgtgattcgtggcccggcagggaacaacgactgccgcatctacgtg
ggtaacctacctccagacatccgaaccaaggacattgaggacgtgttttacaaatacggc
gctatccgcgacatcgacctgaagaaccgccgcgggggaccgcccttcgccttcgttgag
ttcgaggacccgcgagacgcggaagatgcggtgtacggtcgcgacggctacgattacgac
ggctaccgtctgcgggtagagtttccccgaagcggccgtgggaccggccgaggcggcggc
gggggtggaggcggcggagccccgagaggccgctatggcccgccatccaggcggtctgaa
aacagagtggttgtttctggactgcctccgagtggaagctggcaggacttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgtttaccgagatggcactggtgtcgtg
gagtttgtacggaaagaagatatgacgtatgcagttcgaaaactggataacactaagttt
agatctcatgagggagaaactgcctacatccgggttaaagttgatgggcccagaagtcca
agttatggaagatctcgatctcgaagccgtagtcgtagcagaagccgtagcagaagcaac
agcaggagtcgcagttactccccaaggagaagcagaggatcaccacgctattctccccgt
catagcagatctcgctctcgtacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (4)   
   GenBank (5)   
   EMBL (5)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system