KEGG   Rattus norvegicus (rat): 690308
Entry
690308            CDS       T01003                                 
Symbol
Tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
  KO
K15326  tRNA-splicing endonuclease subunit Sen54
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    690308 (Tsen54)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    690308 (Tsen54)
SSDB
Motif
Pfam: tRNA_int_end_N2 tRNA_int_endo_N
Other DBs
NCBI-GeneID: 690308
NCBI-ProteinID: NP_001103046
RGD: 1597379
Ensembl: ENSRNOG00000004598
UniProt: A6HKQ9 D3ZZT6
Position
10:101540479..101549022
AA seq 525 aa
MEPESEPASVEVPAGRVLSASELRAARSRSQKLPQRSHGPKDFLPDGSEAQAERLRLCRQ
ELWQLLAEERVERLGSLVAAEWRPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYL
LECGSIQLFYQDLPLSIQEAYQLLLTEDTLSFLQYQVFSHLKRLGYVVRRFQLSSVVSPY
ERQLNLDGYAQCLEDGSGKRKRSSSCRSVNKKAKALQNSLPPVSLADSSPPACDQSSPYP
EEKPRDSSPEQGSELPMQFLGSPEPCPDPGREDAGCDQESDKIENGAKGTPKPRWNFERI
SFPNMASDSRHTLLPAPAPELLPVNVIGRGTDAESWCQKLNQRREKLSRRDREQQAEVRQ
FREDVNADPEVQGCSTWQEYKELLRRRQMQRSQPRPPHLWGQSVTPLLNPDTADSPAAVL
QRISVLQTTHLADGGYRLLEKSGGLEISFDVYQADAVATFRKNSPGKPYVRMCISGFDEP
VPDLCSLKRLTYQSGDVPLIFALVDHGDISFYSFRDFTLPQDLGH
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggagcccgagtccgaacccgcgtctgtggaggttcccgcgggacgtgtgctcagcgcc
tcggagctccgcgccgcgcgctcgcggtcccagaagctgcctcagcggtcgcatggcccc
aaggacttcctcccggacggctcggaggctcaggcggagaggctgcgcctgtgtcgccag
gagttgtggcagctgctggcggaggagcgcgtggagcgcctgggcagcttggtggccgcg
gagtggagaccagaagaaggctttgtggagttgacatctcctgcggggaaattctggcag
accatgggctactcagaggagggacggcagcggcttcaccccgaagaggccttgtatctg
ctggagtgtggctcgattcagctcttctaccaagacctaccactgtctatccaagaggcc
taccagctgctgctgaccgaggacaccttgagtttcctgcaatatcaggtcttcagccac
ctgaagagactgggctacgtggtccgccggttccagctaagctcagtcgtgtcaccttac
gagcggcagctcaacctggatggctatgcccagtgcctggaggatgggtctggcaagagg
aagaggagttctagctgtcggtctgttaataagaaggccaaggccctgcagaactccctg
ccgcccgtcagcttggcagactccagcccacctgcctgtgaccagagtagcccataccca
gaggagaaacctcgggactcaagccctgagcagggctcggagctccccatgcagtttctg
gggtccccagagccttgccctgatccgggcagggaagatgcggggtgtgaccaggagagt
gacaaaatagagaatggagccaaggggacccctaagccacgctggaactttgagcggatc
tcattccccaacatggcctcagatagtcggcacacgctcctgcctgccccagccccagag
ctgctccctgtcaatgtcattgggcgagggacagatgctgagtcctggtgccaaaagctg
aaccagcggagggagaagctctcccggcgagaccgggagcagcaagcagaggtccggcag
ttccgggaggatgttaacgccgatcccgaggtgcagggctgctccacttggcaggagtac
aaggagctgctgaggagacgacagatgcaaaggagccagccccgacctccacacctatgg
ggccagtctgttacccccttgctgaaccccgatacagccgattctccagccgccgtcctg
caacgtatctctgtactgcagacaacgcaccttgctgatggaggttaccggctgctggag
aagtctgggggcttggagatcagcttcgatgtttaccaggctgacgctgtggctacgttc
cggaaaaacagccctggcaaaccctacgtgcgaatgtgcattagtgggtttgatgaacct
gtcccagacctctgcagcctcaagcggttgacctaccagagtggggatgttcccctgatc
tttgctctggtggatcatggtgacatttccttctacagcttcagagacttcacactgccc
caggatctggggcactga

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