KEGG   Rattus norvegicus (rat): 690358
Entry
690358            CDS       T01003                                 
Symbol
Prdm11
Name
(RefSeq) PR domain-containing protein 11
  KO
K24644  PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    690358 (Prdm11)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    690358 (Prdm11)
SSDB
Motif
Pfam: PRDM2_PR SET Dimer_Tnp_hAT FOG1-like_PR zf_PR_Knuckle DUF4954
Other DBs
NCBI-GeneID: 690358
NCBI-ProteinID: NP_001258459
RGD: 1597330
Ensembl: ENSRNOG00000008674
UniProt: D4A985
Position
3:complement(99381093..99460805)
AA seq 1172 aa
MTENMKECLAHTKAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRLEPSSMEVEPKKLKGKR
DLIVTKSFQQVDFWFCESCQEYFVDECPTHGPPVFVSDTPVPVGIPDRAALTIPQGMEVV
KEVGGESDVRCINEVVPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETK
ANWMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGERLRVWYSEDYMKRLHSMSQET
IHRNLARGEKRLQREKAEQALDNPEDLRGPSHFPVLKQGRSPYKRSFDEGDLHPQAKKKK
IDLIFKDVLEASLESANAEGRQLALSTSLVIRKVPKYQDDDYGRAALTQGICRTPGEGDW
KVPQKVAKELGPLEDEEEEHTSFKADSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQ
AELDMLKSGKVPEPPILPQQVLELPEFSDPAASESMVSCPAIMEDDDQEVDSADESVSND
VMTATDEPSKLSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAF
IIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLALEGRP
YLDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIRQSPCLSIILDGQ
SDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSSTESYLQALDRAFAALGIRLQDEKP
TVGLGVDGANITASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPCLEELE
NNLKQLLSFYRYSPRLMCELRSTASTLCEETEFLGDIRAVRWIIGEQNVLNALIKDYLEV
VAHLKDVSSQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYIFQGEYLLV
SQVDDKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAVKNLRVAEAKFQSIREKICQ
KTQVILAQRFDSRSRVFVKACQVFDLAAWPRNNEELLSFGKEDMVQIFDHLEAIPAFSRD
VCREGMDPRGSLLMEWRDLKADYYTKNGFKDLISHICKYKQRFPLLNKIIQVLKVLPTST
ACCEKGRSALQRVRKNHRSRLTLEQLSDLLTIAVNGPPIASFDAKRALDSWFEEKSGNSY
TLSAEVLSRMSALEQKPMLQAVDHGSEFYPDM
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgactgagaacatgaaggagtgcttggcccacaccaaggcggctgtaggggacatggtg
acagtagtgaagacagaggtctgctcaccactccgggaccaggagtatggccagccctgc
tctcggagactggagccatcttccatggaagttgaacctaagaaactaaagggaaaacgt
gacctcatcgtgaccaaaagcttccagcaagtggacttctggttctgcgagtcctgccaa
gagtactttgtggatgaatgtccgacccatggtccccccgtgtttgtgtctgacacacca
gtgcctgtgggcatcccagatcgggcggccctcaccattccacagggcatggaggtggta
aaggaagttggtggagagagcgatgtgcggtgtataaatgaagtcgtccccaagggtcac
atctttggcccctatgaggggcagatctctacccaggacaagtcagctggcttcttctca
tggctgattgtggacaagaacaaccgctacaagtccatagatgggtcagatgagaccaag
gccaactggatgaggtacgtggtcatttcccgggaggagagggagcagaacctcctggcc
ttccagcacagcgagcgcatctacttccgggcatgccgagacatccggccaggagagcgg
ctgcgggtctggtacagcgaggactacatgaagcgtctgcacagcatgtcccaggaaacc
atccaccgcaacctggcccggggagagaagagattgcagagagagaaggctgagcaagcc
ctggataacccagaagacctaaggggtccctcccatttccctgtgttgaagcagggcaga
agtccttacaagcgcagctttgatgagggggacctccaccctcaggccaagaagaagaaa
atagacctcatcttcaaggacgtcctggaagcctcactggagtctgctaacgcggaaggc
cgccagctggccctgagcacctccctggtcatccggaaagtccccaagtaccaggacgat
gactatggtagagctgccctgacacaaggcatctgcaggaccccaggggaaggggactgg
aaggtccctcaaaaggtggccaaggagctaggcccactggaagatgaagaggaggagcat
acgtcgttcaaggccgacagccccgctgaggcctctctggcatctgacccccacgagctg
cccaccacctccttttgccctaactgcatccgactgaaaaagaaagtgcgggaattgcag
gcggagctagatatgcttaagtctggaaaggtgcctgagcctcccattctgccacagcag
gtactggagctcccagagttctcagatcctgcagcttcagagagtatggtctcctgccca
gccatcatggaggacgacgaccaggaagtggattctgcagacgaatctgtctccaatgac
gtgatgacggcaaccgacgaaccctccaagttgtcctctgccacgggacgccgcatccgg
cgcttcaagcaggagtggctgaagaagttctggttcctaaggtactccccgaccctcaac
gagatgtggtgccatgtgtgccgccagtacacggtgcagtcctcacgcacgtccgccttc
atcatcggctccaagcagttcaagatccacaccatcaaactgcacagtcagagtaacctg
cacaagaagtgcctgcagctgtacaagctgcgcatgcacccggagaagacagaggagatg
tgccgcaacatgaccctgctcttcaacactgcctaccacctggcactggagggaaggccc
tacctcgacttccggccactggcagagctgctgcgtaagtgcgagctcaaggtggtggac
cagtatatgaatgagggggactgccagatcctcatccaccacatcgcccgggcactgcga
gaggacctggtggagcgcatccgtcagtcaccctgcctcagcatcatcctggatgggcag
agtgacgacctcctggctgacacggtggccgtctatgtgcagtataccagcagcgatggg
cccccggccacagaattcctatccttgcaggagctaggcttctccagcacagaaagctat
ctccaggctcttgaccgggcctttgctgctctgggcatccgcttacaggatgagaagcca
actgtgggcctgggagtcgatggggccaacatcaccgccagcttgcgtgccagcatgttc
atgaccatccgcaagacgctgccatggctgctgtgcttgcccttcatggtgcaccggcca
cacctggagatcctggatgccatcagtgggaaggaactgccctgtctagaggagctggag
aacaacctgaagcagctcctcagcttctaccgctactcaccacgcctcatgtgtgagctg
cgctccacggcctctaccctgtgcgaggagactgaattcctgggagacatccgtgccgtg
aggtggatcatcggtgagcagaatgtcttgaatgcccttatcaaggattacctggaagtg
gtggcccacctgaaggatgtcagcagccagacacagcgggcagacgcttccgccatagcc
ctggccctgttgcagttcctcatggactaccagtccatcaagctcatctacttcctgctg
gatgtgattgccgtgctgtcacgcctggcctacatcttccagggagagtacctactggtg
tcacaggtggatgacaagatcgaggaggcaatccaggagatcagtcggcttgcagactcc
ccgggagagtacctgcaggaatttgaggagaatttccgagagagcttcaatgggatcgct
gtgaagaacctcagggtggcagaggccaagtttcagtctatcagggagaagatctgccag
aagacacaggtcattctggctcagaggttcgactcccgaagccgggtctttgtgaaggcc
tgccaagtgttcgacttagccgcctggcccaggaacaatgaggagcttctgagcttcggc
aaggaagatatggttcagatctttgaccacttggaagccattcctgccttctcccgggat
gtgtgccgtgaagggatggacccccgggggagcctgctgatggagtggagagacctcaag
gctgattactacaccaaaaatggcttcaaagacctcataagccacatctgcaagtacaag
cagaggtttccgctcttgaacaagatcattcaggtccttaaagttctccccacctccact
gcctgctgtgagaaaggccgaagtgccctccagcgggtccgcaaaaaccaccgctcacgc
ctgaccctggagcagctcagtgacctgttgacgattgctgtgaacggaccacccatcgcc
agctttgatgccaagcgagccctggacagctggtttgaggagaagtctggcaacagctac
acactttcagccgaggtcctcagtaggatgtctgccttggagcagaagcccatgctgcag
gctgtggaccatggctctgaattctacccagacatgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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