KEGG T01003: 691231

Rattus norvegicus (rat): 691231

Entry

691231            CDS       T01003

Symbol

Gemin5

Name

(RefSeq) gem-associated protein 5

K13133

gem associated protein 5

Organism

rno Rattus norvegicus (rat)

Brite

KEGG Orthology (KO) [BR:rno00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    691231 (Gemin5)
   03041 Spliceosome [BR:rno03041]
    691231 (Gemin5)
Messenger RNA biogenesis [BR:rno03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     691231 (Gemin5)
   mRNA cycle factors
    P-body specific factors
     691231 (Gemin5)
Spliceosome [BR:rno03041]
Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    691231 (Gemin5)

SSDB

Motif

Pfam:

WD40 ANAPC4_WD40 MIOS_WD40 Nup160

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

RGD:

Ensembl:

Position

10:complement(42797975..42843356)

AA seq 1497 aa
MKPEPRTLPPSPNWYCARCSDAAPGGIFGFAARTSVFLVRVGPGAGASPGAPPFRVVGEL
VGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDVETKAVVTEHALHQHTISALHWSPT
VKDLIVSGDEKGVVFCYWLNRSDSQHLFTEPRAIFCLTCSPHHENLVAIGYKDGIVIIID
ISKKGEVVHRLRGHDDEIHSIAWCPLSGEDCLSINQEENSEEPDIPNGKLIAETPITKGC
YLATGSKDQTIRIWSCSRGRGVMVLKLPFLKRRSGGVDPTVKERLWLTLHWPKNQPTQLV
SSCFGGELLLWDLTQSWRRKYTLFSTSAEGHNHSRIVFNLCPLKTEDGKQLLLSTSMDRD
VKCWDMATLECCWTLPSLGGFAYSLAFSPVDVGSLAIGVGDGMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYDTCSNKPPQISSTYHKKTVYRLAWGP
PVPPMSLGGEGDRPSLTLYSCGGEGIVLQHNPWKLSGEAFDINKLMRDTNSIRYKLPVHT
EISWKGDGKVMALGNEDGSIEIFQVPNLKLLCTIQQHHKLVNAIVWHHEHGSRPELSCLL
ASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKVTSLAWSPHHDGRLVSACY
DGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGADDFCVYRWLTSMQDHSRP
PQGKKCIELEKKRLSQFKPKLKKKKKPTLRLPIKQDSSIGNEDESVRENLAPVENGLSDQ
DGEEEAQEPELPPSPVVCGEPVSCTAVSLGLEKSKVTVTSKVASLKKEPPKEKPEALLKK
RKARSMLPLSTSLDHRSKEELHRDCLVLATATHARAELHEDVSADLEERFHLGLFTDRAA
LYRMMETEGKGHLESGHPELFHQLMLWKGDLKGVLQAAAERGELTDSLVAVAPVAGYSVW
LWAVEAFAKQLCFQDQYVKAASYLLSIHRVYEAVELLRSNHLYREAIAVAKARLRPEDPV
LKDLYLSWGSILERDGHYAIAAKCYLGATSAYDAAKVLARKGDAASLRTAAELAAIAGES
ELAASLALRCAQELLLLKNWVGAQEALGLHESLQGQRLVFCLLELLCRHLEEKQPPEVRG
PSSIYHQWATGSEGTLVQRVTGVWRSAFSVDTPEQCRAALQKLQDVKYPSATSNTPFRQL
LLHVCHDLTLAMLSQQAASWEEAVPALLQAVVRSYTSGNFTLMQEIYSAFLPGGCDHLRD
KLGDLSPTMAAFKSLEAFFIYGQLYEVWWSLCGPGSESSIWVWSAESTVSDKQSKPGDSA
SAEDMEQPLGPGLRLSAESERLLSACKELFSERHASLQTSQRTVAEVQETLAEMIRQHQK
SQLCKATANGPNRDEPSQQAERAPSQPPSPTEERNAPVSLPELTRRLTEANERIAEFPES
VKAWPFPDVLECCLVLLHIGSQCPGAVNPEMQQQAQKLLQKYGHTRAYRRHCQIRHT

NT seq 4494 nt +upstreamnt +downstreamnt
atgaaaccagagccgcggacgcttccgccgtcccccaactggtactgcgcgcgctgcagc
gacgcggcgcccggaggcatctttggcttcgctgcgcggacctccgtcttcctcgtccgc
gtgggcccgggcgccggcgcgagcccaggggcgcccccgtttcgagttgtaggagagttg
gtgggacacactgaaagagtatctggtttcactttttctcatcaccctggacaatacaac
ctctgtgccaccagctcagatgatgggactgtgaagatttgggatgtagagaccaaggct
gtagtgacagaacacgcgctccatcagcatacaatatcagcactgcattggtctccgaca
gttaaggacttaatagtctctggggatgaaaaaggagttgttttctgttactggcttaac
agaagtgacagccagcacctcttcacagagcccagggccatattctgtctgacctgttca
cctcatcacgaaaatctagtagccattggctacaaagacggcatagtgattatcattgac
atcagtaaaaagggagaagttgttcacaggcttcgagggcacgacgatgaaatccactcc
atagcctggtgtcctttgtctggtgaagactgcttatctataaaccaagaggaaaactca
gaagaacctgacattcccaatgggaagcttatagcagaaacccccatcacaaaaggctgc
tacttagctacaggaagcaaggatcagaccattcgaatctggagctgttcccgaggccgg
ggtgtaatggttttgaaattgccctttctgaagagaagaagtgggggtgtggacccaaca
gttaaagaacgtctttggttgacacttcattggcccaagaaccaaccaacacagctggta
tccagttgttttggaggtgagctgctgctgtgggacctcacccagtcatggagacggaag
tacacgctcttcagcacctcagcggaagggcacaatcactccagaattgtcttcaacttg
tgtcctttgaagactgaggatggcaaacagctgctattgtccacgtccatggacagagat
gtaaaatgttgggacatggccaccctggagtgttgctggacattaccttctcttggaggt
tttgcctacagcctggccttttcacctgtggacgtgggctccctggccataggtgttggg
gacggcatgatccgggtatggaatacactctccataaagaacaactacgatgtgaaaaac
ttctggcaaggagtcaagtccaaggtcacggcgctatgctggcatccaaacaaggagggc
tgcttagcctttgggaccgatgacggaaaagtgggattgtatgacacctgctccaacaaa
cctccacagatttcaagcacatatcataagaagaccgtatataggttggcttgggggcca
ccagtgccccccatgtcacttggaggggaaggagacaggccttccctcaccttgtacagc
tgtggaggggaaggcattgtgctgcagcataatccctggaagctcagtggagaggccttt
gacatcaacaaactcatgagagacaccaactccattagatacaagctgcctgtgcacaca
gagatcagctggaaaggagatggcaaagtcatggctcttggaaatgaagatggatcaata
gaaatattccaagtcccaaacttgaaactgctctgcaccatccagcagcaccacaagctt
gtgaacgccatagtctggcaccatgagcatggcagccgtccagagctgagctgcctcctt
gcttctggctccaacaatgcagttatctacgtgcacaacctgaaagctgtcctagagagc
aatcctgagtctccaataaccatcacagagccctaccggaccctctcagggcacacagcc
aaggttaccagtctggcatggagcccacatcatgatggaaggctggtatctgcttgctac
gatggcacagctcaggtgtgggatgccctccgagaagaacctttgttcaatttccgagga
catcgaggccggctgttatgtgttgcgtggtccccagtggatccagaatgcatctactca
ggtgcagatgacttctgtgtctacaggtggctgacctccatgcaggaccattcccggcct
cctcaagggaaaaaatgtattgaattagagaaaaaacggctctctcaatttaagccaaag
ctaaaaaagaagaaaaaacctaccttgcgactgcccataaagcaagattcatccattggc
aatgaagatgagagtgtgagggagaacttggcacctgttgagaatggcttgtccgatcag
gatggtgaggaggaagcccaggagccggagctgcctccctctcccgtggtttgtggagaa
cctgtttcctgcactgctgtctccttaggcttggaaaagtcaaaagtcactgttactagt
aaagtcgcctcactgaaaaaggagccacctaaagagaagccagaagccttgctcaagaag
aggaaggctcgctccatgctccccctgagcaccagcttagaccacaggtccaaagaggag
ctccatcgagactgtttggttctagcaacggcaacacacgccagagcagaactgcatgaa
gatgtgtctgccgaccttgaggaacgatttcacttgggccttttcacagacagggctgct
ctgtacaggatgatggagacagaggggaaaggtcacttggaaagtggccaccccgagctt
tttcaccagctcatgctctggaagggagatctgaaaggcgttctccaggctgcagcagag
agaggcgagctcacagacagtctcgtggccgtggcaccagtagctggctacagtgtgtgg
ctgtgggctgtggaagcctttgccaagcagctgtgtttccaggatcagtatgtcaaggct
gcctcctacctgctatccatccacagagtgtacgaagctgtggagcttctcaggtcaaac
catctctacagagaagctattgcagttgccaaggctcggctgcgccctgaggaccctgtt
ctgaaggacctgtacctcagctgggggtccatcctggagagagatggccactatgcaatt
gcagccaagtgctacttaggagccacttccgcctatgatgcagccaaagtcctagccaga
aagggagatgcagcctctcttagaacagctgcagagctggctgccatagcaggagagagt
gagctggctgcttccctggctcttaggtgcgcccaagagctgcttctgctgaagaactgg
gtgggtgcacaggaagccttgggactgcatgaaagcctgcagggccagagactggtgttc
tgcctccttgagcttctatgccggcacctggaggaaaaacagcctccagaggtcagaggc
ccctcttccatttaccaccagtgggccactggttctgagggaaccttggtgcagagagta
actggtgtgtggcgcagcgccttcagtgtggacaccccggagcagtgtcgggccgccttg
cagaagctacaggatgtcaagtacccatcagcaacaagtaacactcccttcagacagctg
ctgcttcatgtctgccatgacctaaccttagcaatgctgagccagcaggctgcttcctgg
gaggaggctgtccctgcactgctgcaggctgtggttcggagctacacctcagggaatttc
accctcatgcaagaaatctactcagcctttctcccaggcggctgtgaccacctacgagac
aaactaggtgacctatctcctaccatggcggctttcaaaagcttagaggcctttttcatt
tatgggcaactgtatgaagtctggtggtcactctgtgggcctggctcagaatcaagcatc
tgggtgtggtcggctgaaagcacagtctctgataaacagagcaagccaggggacagtgcc
agtgctgaagacatggagcagcctctaggcccaggcctgaggctcagtgcggagagtgaa
cgtttgctgagtgcctgcaaggagctcttctcagagaggcatgccagcctacagacctcc
cagaggactgttgctgaagtccaagagacgctggcagagatgatccgccagcaccaaaag
agtcagctctgcaaggccacagccaacggccccaacagagatgaacccagccagcaagca
gagcgggccccttcccaacctccgagcccaacagaagaaagaaatgcaccggtgtctctc
cctgaattaaccagaaggctcacagaggcaaacgagagaatagctgagtttccagagagt
gtaaaggcctggccctttccagatgtgctggagtgctgtctcgtcttacttcacatcggg
tcccagtgtcctggtgctgtgaaccctgagatgcagcaacaggcccagaagctccttcag
aagtatggccacactagagcttacagaagacactgccagattcgacacacatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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