KEGG   Rattus norvegicus (rat): 691729
Entry
691729            CDS       T01003                                 
Symbol
Afg2b
Name
(RefSeq) ATPase family gene 2 protein homolog B
  KO
K26051  ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    691729 (Afg2b)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.10  non-chaperonin molecular chaperone ATPase
     691729 (Afg2b)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    691729 (Afg2b)
SSDB
Motif
Pfam: AAA AAA_lid_3 AAA_16 AAA_5 RuvB_N AAA_22 AAA_33 AAA_14 Rad17 TIP49 bpMoxR AAA_28 AAA_18 TsaE AAA_3 NTPase_1 Viral_helicase1 nSTAND3 Vps4_C AAA_7 NACHT Zeta_toxin AAA_19 IstB_IS21 AAA_17 AAA_30
Other DBs
NCBI-GeneID: 691729
NCBI-ProteinID: NP_001103117
RGD: 1595990
Ensembl: ENSRNOG00000000169
UniProt: D4A2B7
Position
3:130148061..130162458
AA seq 747 aa
MAPDSGPFPDGQFLKLLPVDPRDRGTQRCRLGPAAFRSLGVRLGSPMRISLPAGGCCLCT
AWPRRDGADGFVQLDLQCASPGAAAAAGRISMDRLQPVSCPPLRRLEVWPVLRPQAGAPS
SDAVLEVSQELLRNRPVSRGHVVATPPGIPGPVAALHVVSGTPDPEPAGRVTPHTRITLS
DKPPPQVEPPGEVTLGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGK
TQLVRAVAREAGAELLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDA
LCPRRGGPQRAPESRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVI
IGTPTLKQREAILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAATCALLKNEK
NQNNPKIEETDFLEAFKKVQPSSFRSSIGLTDIRPVGWEQIGGLEDVKLKLKQCVEWPLK
FPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKV
LSQVFRQARANTPALVFLDEIDSVLGSRSVGSSGCDARERVLSVLLNELDGVGVRTVERR
GSKASQQECQEILSRSVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVC
TNNMPIGLNVSLENLAAETCYFSGADLRNLCKEAALFALQENGLEATTVEQEHFTEALKT
VKPSLTLKDLTFYENLFKKELSNLEDH
NT seq 2244 nt   +upstreamnt  +downstreamnt
atggctccggactccgggcccttccccgacggacaatttttgaagctgctgcctgtggat
ccccgggaccggggcacccagcgctgccgcctaggaccggccgccttccgcagcctgggc
gtgcgcctgggctcgccgatgaggatctcgttgcccgccgggggctgctgcctctgcaca
gcttggccacggcgcgacggggcggacggctttgtgcagttagacttgcagtgcgctagc
cccggagccgcggcagctgcggggaggatcagtatggaccgcttgcaaccggtgtcctgt
ccgcccctgcggcgcctagaggtgtggcccgtgctgcggccgcaggcgggagccccgagt
tccgacgcggtgctggaggtatcgcaggagctgctgcgcaaccggccggtgtcgcgagga
cacgtggtggccacccctcccggtatcccgggccctgtagcagctctgcacgtggtgagc
gggacaccggacccagagcccgccgggcgggtcacaccgcacacccgcatcacgctcagc
gacaaacctccgccacaggtcgagcctccgggggaggtgacccttgggggcctgtcggag
acggccgactccctaagggagctgctccgcctgccgctgtgttatccgctcgccttagcc
gcactggggctggcggtgccccgcggggtgctcctggcgggacccccgggagtgggcaag
acccagttagtgcgggccgtggcgcgagaggcgggcgccgagctgctggcggtgagcgcc
ccggcgctgcagggcactcggcccggagagaccgaggagaatgtgcggcgcgtcttccag
cgcgcccaggagctggccagccgcgggcccagcctcctcttcctggacgaggtggacgcc
ctgtgtccccggagaggcggcccccagcgagctcccgagagccgcgtggtggcccaggtg
ttgacgctgctggacggtatccacggggaccgggaggttgtggtcgtgggagccaccaac
cggccagacgagttagacccagcgcttcgcaggccggggaggtttgacagagaggtgatc
attggaactcccacacttaaacagagagaggcaattctgggagtgattacttcaaagatg
cccatctccagtcatatcgatttaggcctgctggcagaaatgacagttggctatgtcggt
gctgacctgacagcactctgtagggaggctgccacgtgtgctcttctcaagaatgaaaag
aaccaaaacaatcctaaaattgaggaaacagattttcttgaagcttttaaaaaggttcag
ccctcatcatttcggagttccatcggactgacagacatcaggcctgttggctgggagcag
atagggggacttgaagatgtgaagctgaagttaaagcagtgtgttgagtggcctctgaag
ttccctcaggagtttgctaggatgggtctgacacagccaaagggccttctcctgtatggt
ccccctggatgtgccaaaaccactctggtgagggccctggccacaagctgccactgctcc
ttcgtgtcagtatgcggggctgacctcttctctccttttgttggagactcagaaaaagtc
ttgtctcaggtatttcgacaagcaagagccaataccccagcgcttgtgtttttggatgaa
attgactcagtcttggggtctcgctcagtcggctcctcgggatgtgatgctcgggagaga
gttctttcagttctgctgaacgagctcgatggtgtgggagttaggacggtagagagaaga
gggagtaaagcaagccaacaggagtgtcaagaaattcttagtcggagtgtcatgattgtt
gtggcgacaaacaggcctgatgtgttagacgatgccttgttacgacctggcagattagat
aagatggtctatgtcccccctcctgatcgagagggcaggctttctattttaaaagtctgt
acaaacaacatgccaatagggctcaatgtttctctagagaacctggcagcagaaacctgt
tatttctctggagctgatctgagaaacctctgcaaagaagctgctctgtttgctctgcaa
gaaaatggactggaagcgaccacagtggaacaggagcacttcacagaagcactcaagact
gtgaagccgtccttaactctgaaagacctgactttctacgaaaacttatttaaaaaagaa
ctttccaacttggaagatcattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (26)   
   Pfam (26)   
All databases (44)   

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