KEGG   Rattus norvegicus (rat): 79116
Entry
79116             CDS       T01003                                 
Symbol
Apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    79116 (Apex1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    79116 (Apex1)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     79116 (Apex1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     79116 (Apex1)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-GeneID: 79116
NCBI-ProteinID: NP_077062
RGD: 2126
Ensembl: ENSRNOG00000009663
UniProt: P43138 A6KEC1
Position
15:26618146..26620330
AA seq 317 aa
MPKRGKRAAAEDGEEPKSEPETKKSKGAAKKTEKEAAGEGPVLYEDPPDQKTSASGKSAT
LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYWSA
PSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFESFILVTAYVPNAGRGLVR
LEYRQRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG
EMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR
SKALGSDHCPITLYLAL
NT seq 954 nt   +upstreamnt  +downstreamnt
atgccgaagcgggggaagagagcggcagcggaagacggggaagaacccaagtccgagcca
gagaccaagaagagtaagggggcagcaaagaaaactgagaaggaggccgcaggagagggc
cctgtcctgtatgaggaccctccagatcagaaaacgtcagccagtggcaaatctgccaca
ctcaagatatgctcctggaatgtggatgggcttcgagcctggattaaaaagaaaggcttg
gattgggtaaaggaagaagcaccagacatcttgtgcctccaagagaccaaatgctcagag
aacaaactcccggctgaactgcaagagctgcctggactcacccatcagtactggtcagct
ccatcagacaaagaaggatatagtggtgtgggcctactttcccgccaatgcccgctcaaa
gtctcttatggcattggtgaggaagaacatgatcaagaaggccgggtgattgtggctgaa
tttgagtcctttatcttggtaacagcctatgttccgaacgcaggaaggggtctggtaaga
ctggagtaccgacagcgatgggatgaagccttcagaaagtttctaaaggacttggcttcc
cggaaacctcttgtgctgtgtggggatctcaatgtggctcatgaagaaatagaccttcgt
aaccccaaaggaaacaaaaagaatgctggttttactccccaggagcgccaaggctttggg
gaaatgctacaggctgtaccactggctgacagcttccggcatctctaccccaacactgcc
tacgcttatactttctggacttacatgatgaatgcccgctctaagaatgttggttggcgc
cttgattactttttgctgtctcactctcttttacctgctttgtgcgacagcaagatccgg
tccaaggctcttggcagtgaccactgtcccatcaccctttacctagcactgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (18)   
   RefSeq(nuc) (6)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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