KEGG   Rattus norvegicus (rat): 79238
Entry
79238             CDS       T01003                                 
Symbol
Hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial precursor
  KO
K01640  hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00280  Valine, leucine and isoleucine degradation
rno00650  Butanoate metabolism
rno01100  Metabolic pathways
rno04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    79238 (Hmgcl)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    79238 (Hmgcl)
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    79238 (Hmgcl)
Enzymes [BR:rno01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.4  hydroxymethylglutaryl-CoA lyase
     79238 (Hmgcl)
SSDB
Motif
Pfam: HMGL-like
Other DBs
NCBI-GeneID: 79238
NCBI-ProteinID: NP_077362
RGD: 620554
Ensembl: ENSRNOG00000009422
UniProt: P97519 A6IT78
Position
5:153461738..153475552
AA seq 325 aa
MATVRKAFPQRLVGLASLRAASTSSMGTLPKRVKIVEVGPRDGLQNEKSIVPTPVKIKLI
DMLSEAGLPVIEATSFVSPKWVPQMADHSDVLKGIQKFPGINYPVLTPNMKGFEEAVAAG
AKEVSIFGAASELFTRKNVNCSIEESFQRFDGVMQAARAASISVRGYVSCALGCPYEGKV
SPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLTAVLHEVPVAALAVHCHDTYGQ
ALANTLVALQMGVSVVDSSVAGLGGCPYAKGASGNLATEDLVYMLTGLGIHTGVNLQKLL
EAGDFICQALNRKTSSKVAQATCKL
NT seq 978 nt   +upstreamnt  +downstreamnt
atggcgacagtgaggaaggctttcccacagaggctggtgggcttggcgtccctccgggct
gcgagcacctcctccatgggcaccttgccgaagcgggtgaagatcgtggaagtcggcccc
cgagatggtctgcagaatgaaaagagtatcgtgccgacgccagtgaaaatcaaactgata
gacatgctatccgaagcagggctcccggtcatcgaggccaccagctttgtctctcccaag
tgggtgccgcagatggctgaccactctgacgtcttgaagggcattcagaagtttcccggc
atcaactacccggtcctgacaccaaacatgaaaggctttgaggaagcggtagctgcaggt
gccaaggaagtgagcatctttggggctgcgtccgagctcttcacccggaagaatgtgaac
tgctctatagaggagagtttccagcgctttgatggggtcatgcaggccgcgagggctgcc
agcatctctgtgagagggtatgtctcctgtgccctcggatgtccctacgaggggaaggtc
tccccggctaaagttgctgaggtcgccaagaagttgtactcaatgggctgctatgagatc
tcccttggggacaccattggcgtaggcacgccaggactcatgaaagacatgctgactgct
gtcctgcatgaagtgcctgtggccgcattggctgtccactgccatgacacctatggccaa
gctctggccaacacgttggtggccctgcagatgggagtgagcgttgtggactcctcggtg
gcaggactcggaggctgtccctatgcaaagggggcgtcaggaaacttggctaccgaggac
ctggtctacatgctgactggcttagggattcacacgggtgtgaacctccagaagctccta
gaagccggggacttcatctgtcaagccctgaacagaaaaaccagttccaaagtggcacag
gccacctgcaaactctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (1)   
   Pfam (1)   
All databases (44)   

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