KEGG   Rattus norvegicus (rat): 79431
Entry
79431             CDS       T01003                                 
Symbol
Bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
  KO
K03729  class B basic helix-loop-helix protein 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    79431 (Bhlhe40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    79431 (Bhlhe40)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    79431 (Bhlhe40)
SSDB
Motif
Pfam: Hairy_orange HLH Oscp1
Other DBs
NCBI-GeneID: 79431
NCBI-ProteinID: NP_445780
RGD: 68439
Ensembl: ENSRNOG00000007152
UniProt: O35780 F7FCF3
Position
4:143174450..143180150
AA seq 411 aa
MERIPSAQPPPTCLPKTPGLEHGDLSGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIMA
LQSGLQAGDLSGRNIEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGSASRKPLDSAPKPVDFKEKPSFLAKGSEGPGKNCVPVIQRTFAPSGGEQSGSDTD
TDSGYGGELEKGDLRSEQPYFKSDHGRRFTVGERVSTIKQESEEPPTKKSRMQLSDEEGH
FVGSDLMGSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPLLYPGLNTSAA
ALSSFMNPDKIPTPLLLPQRLPSPLAHSSLDSSALLQALKQIPPLNLETKD
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggagcggatccccagcgcgcaaccacctcctacctgcctgcccaaaacgccagggctg
gagcacggagacctgtcagggatggattttgcccacatgtaccaagtgtacaagtccagg
cggggaataaaacggagcgaggacagcaaggaaacttacaaattgccgcaccggttgatt
gagaaaaagagacgtgaccggattaacgagtgcattgcccagctgaaggatctcctaccc
gaacatctcaaacttactactttgggtcacttggagaaagcagtggttctcgagctgacg
ctgaagcacgtgaaagcattgacaaacctaattgatcagcagcagcagaaaatcatggcc
ctgcagagcggtttacaagctggtgatctgtcgggaagaaatattgaggcaggacaagaa
atgttctgctccggtttccagacctgtgcccgggaggtacttcagtacctggccaagcat
gaaaacactagggacctgaagtcttcccagcttgtcactcatctccaccgtgtggtctct
gaactcctgcagggtagtgcttccaggaaaccattggactcagctcccaaacccgtggac
ttcaaagagaagcccagcttcctagccaagggatcagaaggccctgggaaaaactgtgtg
ccagtcatccagaggacttttgctccctcgggcggggagcagagtggtagtgacacggac
acagacagtggctacggaggcgaattggagaagggtgacttgcgcagtgagcaaccctac
ttcaagagcgatcacggacgcaggttcaccgtgggagaacgcgtcagcacaattaagcaa
gaatctgaagagccccccaccaaaaagagccgaatgcagctctcagatgaggaaggccac
ttcgtgggcagtgacctgatgggttccccatttcttgggcctcacccacatcagcctccc
ttttgcctgcccttctatctcatcccaccatcggccactgcctatctgcctatgctggag
aaatgctggtatccgacctctgtgccactgttatacccaggcctcaacacctcagcagca
gccctctccagcttcatgaacccagacaagatcccaactcccttgctcctgccccagaga
ctcccttctcccttggcacattcgtcccttgactcttcagccttgctccaggccctgaag
cagatccctcctttaaacttagaaaccaaagactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system