KEGG   Rattus norvegicus (rat): 81002
Entry
81002             CDS       T01003                                 
Symbol
Trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23
  KO
K07963  tripartite motif-containing protein 23 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    81002 (Trim23)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:rno04031]
    81002 (Trim23)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     81002 (Trim23)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    81002 (Trim23)
GTP-binding proteins [BR:rno04031]
 Small (monomeric) G-proteins
  Arf/Sar Family
   Others
    81002 (Trim23)
SSDB
Motif
Pfam: Arf Roc Ras SRPRB G-alpha zf-RING_UBOX zf-RING_5 zf-B_box zf-C3HC4 MMR_HSR1 CEBP_ZZ DUF2857
Other DBs
NCBI-GeneID: 81002
NCBI-ProteinID: NP_001094107
RGD: 621587
Ensembl: ENSRNOG00000012354
UniProt: P36407
Position
2:37036193..37069024
AA seq 574 aa
MAALAVNKPGAGVDSGRQGSRGTAVVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL
SRLPLHGRAIRCPFDRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAAEEALGIS
GESIIRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLAKHRRVPLADKPHEKTMCCQ
HQVHAIEFVCLEEACQTSPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRTF
TEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCVRAYFSDLHETLC
RQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVLAKQEI
TRLLETLQKQQQQFTEVADHIQLDASIPVTFTKDNRVYIGPKMEIRVVTLGLDGAGKTTI
LFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGEKHKLRPLWKHYYLNTQAVVFVVD
SSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRS
WYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA
NT seq 1725 nt   +upstreamnt  +downstreamnt
atggctgccctcgctgtaaacaagcccggagcaggagtagacagtgggcggcagggcagc
cgggggacggctgtggtgaaggttctggagtgtggtgtttgtgaagatgtcttctctctg
caaggagataaagttcctcgccttctcctttgtggccacacagtctgtcatgactgtctc
tctcgcttgcctctgcatggaagagcaatacgttgcccatttgatcgacaagtgacagac
ctaggagattcaggtgtctggggtttgaaaaaaaattttgctttactggagcttttagaa
cgtttgcaaaatggacatattggtcagtatggagctgcagaagaagcccttgggatatct
ggagagagtatcattcgctgtgatgaagatgaagctcacgttgcatctgtgtactgcact
gtgtgtgcgactcacttgtgctcagagtgttctcaagtcactcattctacaaagactctg
gccaagcataggcgagtgcctctagctgataaacctcatgagaagaccatgtgctgtcag
caccaggtacatgccattgagtttgtttgcttggaagaagcttgtcaaactagtcctctc
atgtgctgtgtctgcaaagaatatggaaaacaccagggtcacaagcactcagtactggag
ccagaagctaaccagatccgagcgtcaattttagacatggctcactgcatacgaaccttc
actgaggagatctcagattattccagaaaattagttgggattgttcagcacattgaagga
ggagaacaaatagtggaagatggaattggaatggctcacacggaacacgtcccaggtact
gcagagaatgcacgatcatgtgtcagagcttatttttctgatttgcatgaaactctttgt
cgtcaagaagaaatggctctcagtgttgttgatgcccatgttcgagaaaaactgatttgg
cttaggcagcaacaagaggatatgactattctcttgtcccaggtttcaacagcctgtctc
cattgtgaaaagactttgcagcaggatgattgcagagttgtcttggcaaaacaagaaatc
acaagattattagaaacactgcagaaacagcagcagcagtttacagaagttgcagatcat
attcagttggatgccagtattccagtcacttttacaaaggacaacagagtttatattgga
cccaaaatggaaatacgagtagtcacattaggattagatggtgctggaaaaactactatt
ttgttcaagttaaaacaagatgaatttatgcagcctattccaacaattggttttaatgtg
gaaactgtggaatacaaaaatctaaaattcaccatttgggatgtgggtgaaaaacacaaa
ttaagaccattgtggaaacattattacctcaatacacaagctgttgtatttgttgttgac
agcagtcacagagacagaattagtgaagcacacagtgaacttgcgaagttgttaacagaa
aaagaacttcgagatgccttactcttgatttttgctaacaaacaggatgtcgctggggca
ctttcggttgaagaaatcaccgaacttctcagtctccataaattatgctgcggaaggagc
tggtatattcagggctgtgatgctcgaagtggtatggggctctacgaagggttggactgg
ctgtcccggcaacttgtggctgccggagtgttggatgttgcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (18)   
   RefSeq(nuc) (4)   
   GenBank (7)   
   EMBL (7)   
Protein domain (12)   
   Pfam (12)   
All databases (48)   

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