KEGG   Rattus norvegicus (rat): 81644
Entry
81644             CDS       T01003                                 
Symbol
Opn1sw
Name
(RefSeq) short-wave-sensitive opsin 1
  KO
K04252  short wavelength-sensitive opsin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:rno04030]
    81644 (Opn1sw)
G protein-coupled receptors [BR:rno04030]
 Rhodopsin family
  Vision
   Opsin
    81644 (Opn1sw)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srv 7tm_4 WBP-1
Other DBs
NCBI-GeneID: 81644
NCBI-ProteinID: NP_112277
RGD: 621033
Ensembl: ENSRNOG00000006874
UniProt: Q63652
Position
4:complement(58942685..58945825)
AA seq 346 aa
MSGEDEFYLFQNISSVGPWDGPQYHIAPVWAFHLQAAFMGFVFFAGTPLNATVLVATLHY
KKLRQPLNYILVNVSLGGFLFCIFSVFTVFIASCHGYFLFGRHVCALEAFLGSVAGLVTG
WSLAFLAFERYLVICKPFGNIRFNSKHALTVVLITWTIGIGVSIPPFFGWSRFIPEGLQC
SCGPDWYTVGTKYRSEHYTWFLFIFCFIIPLSLICFSYFQLLRTLRAVAAQQQESATTQK
AEREVSHMVVVMVGSFCLCYVPYAALAMYMVNNRNHGLDLRLVTIPAFFSKSSCVYNPII
YCFMNKQFRACILEMVCRKPMTDESDMSGSQKTEVSTVSSSKVGPH
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgtcgggagaggacgagttttacctgtttcagaatatctcctcagtggggccctgggat
gggcctcagtaccacattgctcccgtctgggccttccacctccaggcagccttcatggga
tttgtcttctttgcagggaccccactcaatgccacagtgttggtggccacactgcactac
aaaaagttgcggcagcccctcaactacattctggtcaatgtatccctcggaggcttcctc
ttctgcatcttctctgtcttcacagtcttcatcgccagctgtcatggatacttcctcttt
ggtcgccacgtttgtgctctggaggccttcttgggctctgtagcaggtctagtgacagga
tggtccttggctttcctggcctttgagcgctaccttgtcatctgtaaaccctttggcaac
atccgcttcaactccaagcacgcactgacggtggttctgattacttggaccattggcatc
ggggtgtccatcccgcccttctttggctggagcaggttcatccctgagggcctgcagtgc
tcctgtggcccggactggtacaccgtgggcaccaagtatcgaagcgagcactatacctgg
tttctgttcatcttctgtttcatcattcctctttccctcatctgtttctcctacttccag
ttgctgaggactctcagagctgtggcggcccagcagcaagagtcagctacaactcaaaag
gctgaacgggaggtgagccatatggtggtggtgatggtgggatccttctgtctctgctac
gtgccctatgctgccctggccatgtacatggtcaacaatcgtaaccacgggctggactta
cggcttgtcaccatccccgccttcttttccaagagttcatgtgtctacaaccccatcatc
tactgcttcatgaataagcagttccgggcctgcatcctggagatggtgtgcaggaagccc
atgacagacgaatctgacatgtctggctctcagaaaacagaagtttctactgtttcttcc
agcaaagttggccctcactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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