KEGG   Rattus norvegicus (rat): 81721
Entry
81721             CDS       T01003                                 
Symbol
Chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6 precursor
  KO
K04808  nicotinic acetylcholine receptor alpha-6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04080  Neuroactive ligand-receptor interaction
rno04725  Cholinergic synapse
rno05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    81721 (Chrna6)
 09150 Organismal Systems
  09156 Nervous system
   04725 Cholinergic synapse
    81721 (Chrna6)
 09160 Human Diseases
  09165 Substance dependence
   05033 Nicotine addiction
    81721 (Chrna6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    81721 (Chrna6)
Ion channels [BR:rno04040]
 Ligand-gated channels
  Acetylcholine (nicotinic)
   81721 (Chrna6)
SSDB
Motif
Pfam: Neur_chan_memb Neur_chan_LBD DUF6057
Other DBs
NCBI-GeneID: 81721
NCBI-ProteinID: NP_476532
RGD: 69281
Ensembl: ENSRNOG00000012283
UniProt: P43143
Position
16:71400615..71407315
AA seq 493 aa
MLNCWGRGDLRSGLCLWICGFLAFFKGSRGCVSEEQLFHTLFAHYNRFIRPVENVSDPVT
VHFELAITQLANVDEVNQIMETNLWLRHVWKDYRLCWDPTEYDGIETLRVPADNIWKPDI
VLYNNAVGDFQVEGKTKALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWT
YDKAEIDLLIIGSKVDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLP
MFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVI
PLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPATHTMPKWVKTMFLQVFPSILMMRRPLD
KTKEADGVKDPKTHTKRPAKVKFTHRKEPKLLKECRHCHKSSEIAPGKRLSQQPAQWVAE
NSEHPPDVEDVIDSVQFITENMKSHNETKEVEDDWKYMAMVVDRVFLWVFIIVCVFGTVG
LFLQPLLGNTGAS
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgctgaactgctggggtcggggagaccttcgctccggtttgtgtctgtggatatgtgga
ttcttggctttctttaaaggcagtagaggctgtgtgtctgaggaacagctcttccacaca
ctcttcgcccactacaaccgcttcatccggccagtggaaaacgtttctgatcccgtcacg
gtgcactttgagttggccatcacgcagctggccaatgtggatgaagtcaaccagattatg
gagaccaatctgtggctgcgtcacgtctggaaggactacagattgtgttgggatccaacg
gagtacgatggcatcgagacgcttcgtgttccagcagataacatctggaagcctgacatc
gttctgtataataatgccgtcggcgacttccaggtcgaaggcaagaccaaagctcttctt
aagtacgatggggtgataacctggaccccgccagccatctttaagagttcctgtccaatg
gacatcaccttcttcccatttgatcatcaaaactgctccctgaaatttgggtcctggact
tacgacaaggctgaaatcgaccttctcatcattggctctaaagtggacatgaacgacttt
tgggaaaacagtgagtgggaaattgtcgatgcctctggctacaagcatgacatcaagtac
aactgctgtgaagagatttacacagatatcacctactcgttctacatcaggagactgccc
atgttttataccatcaatctcatcatcccctgcctcttcatttcctttctcaccgtgctg
gtcttttaccttccttccgactgtggcgagaaagtgactctttgcatctcggttctgctt
tctctaactgtctttttgctggtgattacagagaccatcccatccacgtctctcgtgatc
ccactagtgggtgagtatctactgttcaccatgatctttgtcacgctgtccattgtggtg
accgtgtttgtgttgaacatacactacaggaccccagcaacgcataccatgcccaagtgg
gtgaagaccatgttccttcaggtcttcccctcgattctgatgatgaggagacctctggac
aagacaaaggaagcagatggtgttaaggaccccaaaacccacaccaagaggccggccaag
gtcaagtttactcatcgaaaagaacccaagcttctaaaggaatgccgccactgccataag
tcaagtgagatagcgcctggcaagaggttaagccagcagcctgcacagtgggtggcagag
aattcagagcacccacctgatgttgaagacgtgatcgatagtgttcaattcataacagaa
aacatgaaaagccacaatgaaacaaaggaggtagaagatgactggaaatacatggccatg
gtggtggacagagtcttcctctgggtgtttataatcgtctgtgtgtttggaactgtgggg
ctctttctacagccactgcttgggaacacaggagcgtcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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