KEGG   Rattus norvegicus (rat): 81740
Entry
81740             CDS       T01003                                 
Symbol
Pcm1
Name
(RefSeq) pericentriolar material 1 protein
  KO
K16537  pericentriolar material 1 protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    81740 (Pcm1)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    81740 (Pcm1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Centriolar satellite
     81740 (Pcm1)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   81740 (Pcm1)
SSDB
Motif
Pfam: PCM1_C
Other DBs
NCBI-GeneID: 81740
NCBI-ProteinID: NP_112338
RGD: 620901
Ensembl: ENSRNOG00000010155
UniProt: G3V7E6 A6JPT8
Position
16:complement(57711833..57808842)
AA seq 2026 aa
MATGGGPFEEVMHDQDLPNWSNDSVDDRLNNMEWGGQQKKANRSSEKNKKKFGVASDKRV
TNDISPESSPGVGRRRTKVPHTFPHSRYMTQMSVPEQAELEKLKQRINFSDLDQRSIGSD
SQGRATAANNKRQLGENRKPFNFLPMQINTNKSKDATASLPKRETTTSAQCKELFASALS
NDLLQNCQVSEEDGRGEPAMESSQIVSRLVQIRDYITKASSMREDLVEKNERSANVERLT
HLIEHLKEQEKSYMKFLQKILARDPQQEPMEETENLKKQHDLLKRMLQQQEQLRALQGRQ
AALLALQHKAEQAIAVMDDSVVTETTGSLSGVSITSELNEELNDLIQRFHNQLRDSQPPA
VPDNRRQAESLSLTREISQSRNPSVSEHLPDEKVQLFSKMRVLQEKKQKMDKLLGELHTL
RDQHLNNSSFVPSTSLPRSGDKRSSTVALSAPVGFAPAVNGESNSLISSVPCPAASLVSQ
NESENEGHLNPAEKLQKLNEVQKRLNELRELVHYYEQTSDMMTDAVNENTKDEETEESEY
DSEHEHSEPVTNIRNPQVASTWNEVNTNSNTQRGSNNREGRSINSSCEINNRSAANIRPL
TTPLLDCRYNREGEQRLRVARGEDEEEEVEEEGVSGASLSSRRSSLVDEAPEDEEFEQKI
SRLMAAKEKLKQLQDLVAMVQDDDATQVLVPAASNLDDFYVAEEDTKQNSNNARENSNKV
DTGVNEKTREKFYEAKLQQQQRELKQLQEERKKLIEIQEKIQAVQKACPDLQLSATSISS
GPTKKYLPAITSTPTVNENETSTSKCDIEPEDSSVVDNELWSDMRRHEMLREELRQRRKQ
LEALMAEHQRRQGLAETASPVAVSLRSDGSENLGTPQQSRTEKTMATWGGSTQCALDEDG
DEDGYLSEGIVRTDEEEEEEQDASSNDNFPMYHPSMNQNSYNVKETKNRWKNHRPVSADG
NYRPLAKTRQQNISMQRQENLRWVSELSYIEEKEQWQEQINQLKKQLDFSVNICQTLMQD
QQTLSCLLQTLLTGPYSVLPSNVASPQVHLIMHQLNQCYTQLTWQQNNVQRLKQMLTELM
RQQNQHPEKPRSKERGSSASHPSSPSLFCPFSFPTQPVNLLNLPGFTNFPSFAPGMNFSP
LFPSNFGDFSQNVSTPTEQQQPLAQNPSGKTEYMAFPKPFESSSSLGAEKQRNQKQPEEE
TENTKTPWLYDQEGGVEKPFFKTGFAVSVEKATNSNRKRQPDTSRRGRQFDEESLESFSS
MPDPIDPTTVTKTFKTRKASAQASLASKDKTPKSKSKKRNSTQLKSRVKTIGYESASVSS
TCEPCKSRNRHSAQTEEPVQAKLFSRKNHEQLEKIIKYSRSAEISSETGSDFSMFEALRD
TIYSEVATLISQNESRPHFLIELFHELQLLNTDYLRQRALYALQDIVSRHISESDEKEGE
NIKSVNSGTWVASNSELTPSESLVTTDDETFEKNFERETHKITEQNDADNVSVMSVSSNF
EPFATDDLGNTVIHLDQALARMREYERMKTETESNSNMRCTCRVIEDEDGAAATTTVSNA
EETPIIENHSSPQPTSDVSAVPCPRIDTQQLDRQIKAIMKEVIPFLKEHMDEVCSSQLLT
SVRRMVLTLTQQNDESKEFVKFFHKQLGSILQDSLAKFAGRKLKDCGEDLLVEISEVLFN
ELAFFKLMQDLDNNSIAVKQRCKRKIEAAGVIQSYAKEAKRILEGDRGSPAGEIDDEDKD
KDETETVKQTQTSEVYDAKGPKNVRSDVSDQEEDEESERCPVSINLSKAESQALTNYGSG
EDENEDEEMEDFEESPVDVQTSLQANTETTEENEHDNQVLQHDLEKTQESTNVPSDQEGT
SKNDQDSSPVKPCYLNILENEQHLNSATHKDSLTTTTDSSKQPDPMPLPLTASETLVPRV
KEVKSAQETPESSLAGSPDTESPVLVNDYEAESGNISQKSDEEDFVKVEDLPLKLTVCSE
AELRKKMVEEEQKNHLAGEICEMQTEELAGNPQILKEPETVGAQSV
NT seq 6081 nt   +upstreamnt  +downstreamnt
atggccacgggaggaggtccttttgaagaagtcatgcatgatcaggacttaccgaactgg
agcaatgacagtgtggatgacagactcaataatatggagtggggtggccaacagaagaag
gccaacagatcatcagaaaagaataagaaaaagtttggtgtagcaagtgataagagggta
actaacgatatttctccggagtcatcaccaggagttggaaggcgaagaacaaaggtccca
cacacgtttccgcacagtagatacatgactcagatgtctgttccagagcaggccgaacta
gagaagcttaaacagcggataaacttcagcgatttagatcagagaagtattggaagtgat
tctcaaggtagagcaacggcggctaacaacaaacgtcagcttggtgaaaatcgaaagccc
ttcaactttttgcctatgcagattaatactaacaagagcaaggatgccactgcaagtctt
ccaaaaagagagacaactacgtcagcacagtgcaaagagctgtttgcttctgctctaagt
aatgaccttttgcaaaactgtcaagtctctgaagaagatgggagaggagagcctgcaatg
gagagcagccagattgtaagcaggcttgttcaaattcgtgactatattactaaagctagt
tctatgcgagaagatcttgtagagaaaaatgaaagatctgctaatgttgagcgtcttact
catctaatagagcaccttaaagaacaagaaaagtcatatatgaaatttctccagaaaatc
ctagccagagatcctcagcaggagcctatggaagagacagaaaatttgaagaaacaacat
gatttattaaaaagaatgttacaacagcaggaacagctgcgagctctacagggccgacaa
gctgctctgctagctttgcagcataaagcagagcaagctatagctgtgatggatgactct
gttgttacagaaactacaggaagcttatctggagtcagcatcacatctgaactaaatgaa
gaactgaatgatttaattcagcgtttccataatcagcttcgtgattctcagcctccagct
gttccagacaacagaagacaggcggaaagtctttcattaactagagagatttctcagagc
agaaatccctcagtttctgaacatttacctgatgaaaaagtacagctgtttagcaaaatg
agagtactacaggaaaagaaacagaaaatggacaaattacttggagaacttcataccctc
cgagatcagcatctgaacaactcatcctttgtgccttcaacttctctcccaagaagtggg
gataagagaagttcaactgtagctctctctgctcctgtgggctttgcaccagctgttaat
ggagagtccaatagtcttatctcatctgttccttgtcctgccgcctctctagtttctcag
aatgagagtgaaaatgaaggtcatctaaatccagctgaaaaactacagaagttaaatgaa
gttcaaaagagattgaatgaactgagagaattagttcattattatgaacaaacatcagat
atgatgacagatgctgtaaatgaaaatacaaaagatgaagaaactgaagagtcagaatac
gattctgaacatgaacattctgagcctgttactaacattagaaatccacaggtagcttcc
acctggaatgaagtgaatactaacagtaacacacagcgcggctctaataatagagaaggg
cgatccattaattctagctgtgaaattaataacagatctgctgccaacatcagacctcta
accacgcctctcttagactgtcgatataacagagaaggagaacagaggctgcgtgtagca
cgtggtgaagatgaggaagaggaagtagaagaggaaggagtcagtggggcttcattatct
agtcgtaggagcagtctggttgatgaggcaccagaagatgaagagtttgaacagaagatt
agtagactcatggctgcaaaagagaaacttaaacagctccaggatcttgttgctatggtg
caggatgatgatgcaactcaagtgcttgttcctgctgcatcaaatttggatgacttctat
gtagcagaagaagataccaaacaaaattccaataatgcaagagaaaattctaataaagta
gatactggggtaaatgaaaaaacaagagagaaattttatgaggccaaactacagcagcag
cagagagagcttaaacagttgcaggaggaaagaaagaaattgattgaaattcaagagaaa
attcaagcagttcaaaaggcatgccctgaccttcagctatcagccactagtataagtagt
ggtcccacaaaaaaatatctgccagctattacgtcaactccgactgttaatgagaatgag
actagtacaagcaagtgtgatattgagcctgaagattcatcagtagtggataatgagctg
tggtcagacatgcgaagacatgaaatgttgagggaagagctgcgacagagaaggaagcaa
cttgaagctctaatggctgaacaccagaggaggcaagggctggctgagaccgcatctcca
gtggctgtgtcactgagaagtgacggatctgagaacctgggcactcctcagcaaagtagg
acagaaaaaacaatggcaacctggggaggctctactcagtgtgcattagatgaagatgga
gatgaggatggttatctttcagaaggaattgttcgaacagatgaagaggaagaagaggag
caggatgccagttccaatgataacttccctatgtatcatcctagcatgaatcaaaattcc
tacaatgtaaaggaaaccaaaaacaggtggaagaaccatcgccctgtttcagcagatggg
aattaccgtcctttagccaagacaaggcagcagaatatcagcatgcaacgacaagaaaac
ctacgatgggtgtcagagctctcttacatagaagagaaggaacagtggcaagaacaaatt
aatcagctaaagaaacaacttgatttcagtgtcaatatttgtcagactctgatgcaagac
cagcagactttatcttgcttgctgcagactcttctaacaggtccatacagtgttctgccc
agcaatgtagcgtcccctcaagtacaccttatcatgcaccagctgaaccagtgctacaca
cagctaacatggcagcagaataatgtccagaggttaaaacaaatgctaactgaacttatg
cgccaacaaaatcagcacccagaaaagcctagaagcaaagaaagaggcagcagtgcctca
cacccctcttctcccagtttattttgtcctttcagcttcccaacacagcctgtaaatttg
ctgaacctgcctgggtttactaacttcccatcttttgcaccaggaatgaatttcagccct
ttatttccttctaattttggagatttttctcagaatgtttctacacccactgaacagcag
cagccattagctcaaaatccttcagggaaaacagagtatatggctttcccaaaacccttt
gaaagcagttcttctcttggagcagaaaagcaaaggaatcagaaacagcctgaagaggaa
actgaaaacactaagacaccatggttatatgatcaagaaggaggagtagaaaagccattt
ttcaagactggatttgcagtgtctgtagagaaagctacaaatagtaaccgcaaacgtcaa
ccagatacaagcaggagaggacgtcagtttgatgaagagtcattggaaagctttagcagt
atgcctgaccccatagatccaaccacagtaactaaaacatttaaaacaaggaaagcatct
gcacaggccagcctggcttctaaagacaaaactcccaaatcaaagagtaagaagaggaat
tctactcagctgaaaagtagagttaaaactattgggtatgaaagtgccagtgtgtctagc
acatgtgaaccttgcaaaagtaggaacagacattcagcccagactgaagagcctgttcaa
gcaaagttattcagcagaaagaatcatgaacagctggaaaaaataataaaatatagtagg
tctgcagaaatatcttcagaaactggaagtgatttttccatgtttgaagctttacgggat
actatttattccgaagtggctacattaatttctcaaaatgaatctcgtccacattttctt
attgaacttttccatgagctgcagctcctcaatacagactacttgagacagagagcttta
tatgcgctgcaggatattgtatccagacatatttctgaaagtgatgaaaaagaaggggaa
aatataaagtctgtgaattctggcacttgggtggcatcaaactccgaacttactccaagt
gagagccttgttactactgatgatgaaacgtttgagaagaactttgaaagagaaacacat
aaaataactgaacagaatgatgctgacaatgtgagtgtcatgtctgtgtcttccaacttt
gagccatttgcaacagacgacctaggcaacaccgtgattcacttggatcaagcattagcc
agaatgagagaatatgaacgcatgaagactgagacagaaagtaactcaaatatgagatgc
acttgcagggttattgaggatgaagatggtgctgccgccaccaccacagtcagtaatgca
gaagaaactcccattattgagaatcacagttcaccacaacctacaagtgacgtttctgcc
gtcccctgtcctagaattgacactcagcaactggaccgccaaattaaagcaattatgaaa
gaagtcattccctttttgaaggagcacatggatgaagtatgttcttctcagcttctcact
tcagtgagacgtatggtgttgacccttacccagcagaacgacgagagcaaagagtttgtg
aagttctttcataaacagctaggaagtatattacaggattcactagcaaaatttgcaggc
agaaaactgaaagactgtggagaagatcttcttgtggagatatctgaagtgttgtttaat
gaattggctttctttaagctcatgcaagatttggataataacagcatagctgttaaacag
agatgcaaaaggaaaattgaagcagctggagtgatacagtcttatgcaaaagaggccaaa
aggattcttgaaggagatcgtggctcacctgctggagagattgatgatgaagacaaagac
aaggatgagactgaaactgttaagcagactcagacttcagaagtatatgatgctaaaggt
cccaaaaatgtaagatctgatgtttctgatcaagaggaagatgaagaaagtgaacggtgt
ccagtgtctatcaatctatctaaagcagaaagtcaggctttaactaattatggaagtgga
gaagatgagaatgaggatgaagaaatggaagactttgaagagagtcctgtggatgttcag
acttcgcttcaggctaacactgaaactacagaagaaaatgaacatgacaatcaggttctg
caacatgatcttgaaaaaacacaagaaagtacaaatgtaccatcagaccaagaaggaact
agtaaaaatgatcaagacagctctcctgtgaaaccttgttatctcaatatcttggaaaat
gaacagcatttaaacagtgctacccataaggactcactcactactactactgattcatct
aaacagcctgaccctatgccattacccttgactgcaagtgaaaccctagtgcctagagtc
aaagaagttaaatctgctcaggagactcccgagagctctctggctggaagtcctgacact
gaatctccagtgttagtcaatgactacgaagcagaatctggtaacataagtcaaaagtct
gatgaagaagactttgtgaaagttgaggacttgccactcaaactgacagtctgttcagag
gcagagctgaggaagaaaatggtagaagaagaacagaaaaaccatttagctggtgagata
tgtgaaatgcagactgaagaattagctggaaaccctcagatactgaaagaacctgaaaca
gtgggagcccagagtgtatga

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