KEGG   Rattus norvegicus (rat): 81785
Entry
81785             CDS       T01003                                 
Symbol
Ssrp1
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    81785 (Ssrp1)
   03036 Chromosome and associated proteins [BR:rno03036]
    81785 (Ssrp1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    81785 (Ssrp1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     81785 (Ssrp1)
SSDB
Motif
Pfam: PH1_SSRP1-like Rttp106-like_middle SSrecog POB3_N HMG_box SSRP1_C HMG_box_2
Other DBs
NCBI-GeneID: 81785
NCBI-ProteinID: NP_112383
RGD: 621143
Ensembl: ENSRNOG00000008825
UniProt: Q04931 A6HMS9
Position
3:90531024..90541132
AA seq 709 aa
MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE
SFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRKKSSEGKK
GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA
EDARREYEKAMKEYEGGRGDSSKRDKSKKKKKVKAKLEKKSTPSRGSSSKSSSRQLSDSF
KSKEFVSSDESSSGENKSKKKRRRSEDSDEEELASTPPSSEDSASGSDE
NT seq 2130 nt   +upstreamnt  +downstreamnt
atggcagagacattggagttcaacgacatcttccaggaggtgaaagggtccatgaatgat
gggaggcttcgattgagccgtcagggtatcatctttaagaacagcaagacgggcaaagtg
gacaacatccaggccggggagttgaccgaaggcatctggcgtcgggtagcattaggccat
ggacttaaactgctcacaaagaatgggcatgtctacaagtatgatggcttccgtgaatcg
gaatttgagaagctctctgactttttcaaaacccactatcgccttgagctgatggagaag
gatctctgtgtgaagggctggaactgggggacagtgaaatttggtgggcagctgctttct
tttgacattggtgatcaaccagtctttgagatacccctaagcaatgtgtcccagtgtaca
acaggcaagaatgaggtgaccctggaattccaccagaacgatgatgctgaagtatctctc
atggaggtgcgcttctatgtccctcccacgcaggaagatggagtggaccctgtggaggcc
tttgcccagaatgtcctgtcaaaggcagatgtgatccaggccactggagatgccatctgc
atcttccgggagctgcagtgtttgactcctcgtggtcgttacgatatccggatctaccct
acctttctacacctgcatggcaaaacctttgactacaagatcccctatactacagttctc
cgtctcttcctactgccccacaaggatcagagacagatgttctttgtgatcagcctggat
ccccccatcaagcagggccaaactcgttaccacttcctgatcctcctcttctcaaaggat
gaggacatctccttgactctcaacatgaatgaggaagaagtagaaaagcgctttgagggg
cgactcaccaagaacatgtcaggatccctttatgagatggttagccgggtcatgaaagca
cttgtaaaccgtaaaatcacagtcccaggcaacttccaagggcattcgggggcccagtgt
atcacctgctcctataaggccagctcaggactcctgtacccactggagcggggcttcatc
tatgtgcacaagccccctgtgcacatccgcttcgatgagatctctttcgtcaactttgcc
cgtggcaccacaaccactcgttccttcgactttgagattgagaccaagcaaggcactcag
tataccttcagcagcattgagcgggaagagtatggaaagctgtttgattttgtcaatgca
aaaaagctcaacatcaagaacagagggctgaaagagggcattaacccaggttatgatgat
tacgctgactctgatgaagaccagcatgatgcctatttggagaggatgaaggaggagggc
aagatccgggaggagaatgccaatgacagcagtgacgactcaggagaagaaactgatgag
tccttcaatcctggtgaagaagaagaagatgtggcagaggagtttgatagcaatgcctct
gccagctcctccagtaatgagggcgacagcgaccgagaagagaagaagcggaaacagctc
aaaagagccaagatggccaaggatcggaagagccgcaagaagtcttcagaggggaagaag
ggtaaggatccaaatgcccccaagaggcctatgtctgcgtacatgttgtggcttaatgca
agccgagagaagatcaagtcagatcaccctggcatcagcatcacagatctttccaagaag
gcaggcgaaatctggaagggaatgtccaaagagaagaaagaggagtgggaccgcaaggcc
gaggatgctaggagggagtatgagaaagccatgaaagagtatgaaggaggacgaggggac
tcgtctaaaagggacaagtctaagaagaaaaagaaagtaaaagcaaagttggaaaagaaa
tccactccttcccggggctcatcatccaagtcttcatccaggcagttgagcgacagcttc
aagagcaaagagtttgtgtccagtgacgagagctcttcaggcgagaacaagagcaaaaag
aagaggaggcggagcgaggactctgatgaagaggaactagccagtactcctccaagctca
gaggactctgcctcaggatctgatgagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (15)   
   RefSeq(nuc) (9)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (44)   

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