KEGG   Rattus norvegicus (rat): 81824
Entry
81824             CDS       T01003                                 
Symbol
Arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
rno04530  Tight junction
rno04666  Fc gamma R-mediated phagocytosis
rno04810  Regulation of actin cytoskeleton
rno05100  Bacterial invasion of epithelial cells
rno05132  Salmonella infection
rno05135  Yersinia infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    81824 (Arpc1a)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    81824 (Arpc1a)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    81824 (Arpc1a)
 09150 Organismal Systems
  09151 Immune system
   04666 Fc gamma R-mediated phagocytosis
    81824 (Arpc1a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    81824 (Arpc1a)
   05135 Yersinia infection
    81824 (Arpc1a)
   05100 Bacterial invasion of epithelial cells
    81824 (Arpc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    81824 (Arpc1a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    81824 (Arpc1a)
Membrane trafficking [BR:rno04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    81824 (Arpc1a)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     81824 (Arpc1a)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Rax2 RMC1_N LytB_SH3
Other DBs
NCBI-GeneID: 81824
NCBI-ProteinID: NP_112408
RGD: 620834
Ensembl: ENSRNOG00000000996
Vega: OTTRNOG00000000693
UniProt: Q99PD4 A6K1G3
Position
12:complement(14616245..14639052)
AA seq 370 aa
MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVSVADASKSVQVS
TLRTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDVPKQSIQRNMSAM
ERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtctctgcatcagtttctgctagagccaatcacctgccatgcctggaacagggatcgg
acccagatcgcactgagccccaataatcatgaagtgcacatctacaagaagaatgggagt
cagtggacgaaagctcacgagctgaaggaacataacggacacatcacaggtattgactgg
gctcctaagagcgaccgtattgtcacttgtggggcggaccgcaacgcctatgtctggagt
cagaaagatggcatctggaagccgaccctggtgatcctgaggattaaccgtgcagccact
ttcgtgaagtggtctccactcgagaacaagtttgctgtggggagtggagcccggctcatc
tctgtctgctactttgagtctgaaaatgactggtgggtcagcaagcacattaagaagccg
atccgctccacagtcctcagcctggactggcatcccaacaacgttttgctggctgcaggc
tcctgtgacttcaaatgcagagtattttcggcctacatcaaagaggtggatgagaagcca
gccagcacgccctggggcagcaagatgccttttggtcagctgatgtctgagtttggtggc
agtggcactggtggctgggtgcacggggtcagcttctctgccagtgggagccggctggcc
tgggtcagccacgacagcacagtgtctgtcgctgatgcctcaaaaagtgtgcaggtttca
actctgagaacggagttcctgccgctgctcagtgtgtcatttgtctcagagaacagcgtt
gtggctgccggccatgactgctgcccgatgctctttaactacgatgaccgtggctgtttg
acctttgtgtccaagctagacgtcccaaaacagagcatccagcgcaacatgtctgctatg
gaacgcttccgtaacatggataagagggccactaccgaggaccgcaacacagccttggaa
acactgcaccagaacagcatcactcaagtgtctatttatgaagtggacaagcaagattgt
cgcaaattttgcactactggcatcgatggagccatgacaatctgggatttcaagactcta
gagtcttccatccagggtctccggataatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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