KEGG   Rattus norvegicus (rat): 81859
Entry
81859             CDS       T01003                                 
Name
(RefSeq) sharpin
  KO
K20894  shank-associated RH domain-interacting protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04217  Necroptosis
rno04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    81859
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    81859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    81859
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   LUBAC complex
    81859
SSDB
Motif
Pfam: Sharpin_PH zf-RanBP ubiquitin
Other DBs
NCBI-GeneID: 81859
NCBI-ProteinID: NP_112415
RGD: 631353
Ensembl: ENSRNOG00000012812
UniProt: Q9EQL9 A6HS86
Position
7:complement(109951336..109955552)
AA seq 381 aa
MSPPAGGAAAAADPASPVVLLAVQAAVRLLGAGHEDEAQLRKLQLKADPERPGRFRLGLL
GIEPGAVSLEWPLESICYTIRGPNQHELQPPPGGPGTFSVHFLNSEEAQQWAALVRDATA
EGQNGNDSTAPVPTPAMCPTSPPCSSVTPTPKATQPEMDLPQGSGNLKKEELATHLAQAI
AGGDEKAAAQVAAILAQHHVALNVQLLEAWFPRGPIRLQVTVEDATSVLSSSSSAHVSLQ
IHPHCSIAALQEQVFSEFGFPPAVQRWVIGRCLCMPERSLASYGVSQDGDPAFLYLLSAP
REVSGHSPQHSKMDRKLGCLFPQSLELPHNLQASSSSLPSPPQPGWSCPSCTFINASNRP
GCEMCSTQRPCAWDPLTATST
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcgccgcccgccggcggtgcggcagcggctgcagaccctgcttcacctgtggtgctc
ctggcagtgcaagccgcggtgagactcctgggcgccggacatgaagacgaagcgcagctg
cgaaagctgcagttgaaagccgaccctgagcggcctggacgcttccggctgggactgtta
ggcattgagccaggggcggtcagtttagaatggcccttggagtctatttgctataccatt
cgtggtcctaaccaacacgagctgcagcctccacctggaggtcctggaaccttcagtgtg
cacttcctcaactctgaggaagcacagcagtgggcagcactggtgcgagatgccaccgca
gaaggacaaaatggcaatgacagcacagccccagtcccaaccccagccatgtgccccact
tctccaccatgttcttctgtgactccaacacctaaagcaacccaaccagagatggacctt
cctcaaggttctggaaacttgaaaaaagaagagctggctacacacctggcccaggccatt
gcaggtggggatgagaaagcagcagcccaagtggcggcaatcctggcacagcatcatgtg
gctctcaatgtccagctcttagaggcctggttcccacggggtcccataaggctgcaagtc
acagttgaagatgccacatcggttttatcctcttcgtcgtctgcccatgtctcactgcag
atccacccacactgttccattgcagccctccaggaacaggtgttctcagagttcggtttc
ccaccagctgtgcagcgctgggtcattggccggtgcctgtgtatgcctgaacgaagcctt
gcttcctatggggtctctcaagatggggaccctgcttttctttacttgctctcagccccc
cgagaagtttcaggacacagccctcaacactccaagatggataggaaattaggatgcttg
tttcctcagtcattggagctgcctcataacctccaggcatccagttccagtctcccaagt
ccccctcagcctggctggtcttgcccttcctgcaccttcatcaatgcttcaaaccgccct
ggctgtgagatgtgtagcacccaaaggccctgtgcttgggatccccttactgcaacttcc
acctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system