KEGG   Rattus norvegicus (rat): 83467
Entry
83467             CDS       T01003                                 
Symbol
Slit3
Name
(RefSeq) slit homolog 3 protein precursor
  KO
K06850  slit 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    83467 (Slit3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:rno00536]
    83467 (Slit3)
Glycosaminoglycan binding proteins [BR:rno00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   83467 (Slit3)
SSDB
Motif
Pfam: LRR_8 EGF LRR_4 LRR_5 hEGF Laminin_G_2 LRR_9 LRRNT Laminin_G_1 LRRCT JAG1-like_EGF2 DL-JAG_EGF-like EGF_3 FXa_inhibition Laminin_G_3
Other DBs
NCBI-GeneID: 83467
NCBI-ProteinID: NP_112611
RGD: 69311
Ensembl: ENSRNOG00000007377
UniProt: O88280
Position
10:20075929..20660704
AA seq 1523 aa
MAPGRTGAGAAVRARLALALALASILSGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIP
RNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNK
LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL
RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFT
LCMAPVHLRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTE
IPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL
VLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK
GLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKS
KKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLSRIPSHLPEYTTDLRLN
DNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRM
FRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINL
LSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGNEENSCQ
LSPRCPEQCTCVETVVRCSNRGLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQLTLI
DLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPE
GSFNDLTSLSHLALGINPLHCDCSLRWLSEWIKAGYKEPGIARCSSPESMADRLLLTTPT
HRFQCKGPVDINIVAKCNACLSSPCKNNGTCSQDPVEQYRCTCPYSYKGKDCTVPINTCV
QNPCQHGGTCHLSESHRDGFSCSCPLGFEGQRCEINPDDCEDNDCENSATCVDGINNYAC
VCPPNYTGELCDEVIDYCVPEMNLCQHEAKCISLDKGFRCECVPGYSGKLCETDNDDCVA
HKCRHGAQCVDAVNGYTCICPQGFSGLFCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQE
PTCRCPPGFAGPRCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGILLYKGD
NDPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPK
SLGKLQKQPAVGINSPLYLGGIPTSTGLSALRQGADRPLGGFHGCIHEVRINNELQDFKA
LPPQSLGVSPGCKSCTVCRHGLCRSVEKDSVVCECHPGWTGPLCDQEAQDPCLGHSCSHG
TCVATGNSYVCKCAEGYEGPLCDQKNDSANACSAFKCHHGQCHISDRGEPYCLCQPGFSG
NHCEQENPCLGEIVREAIRRQKDYASCATASKVPIMVCRGGCGSQCCQPIRSKRRKYVFQ
CTDGSSFVEEVERHLECGCRECS
NT seq 4572 nt   +upstreamnt  +downstreamnt
atggcccccgggcggaccggggccggcgccgctgtgcgcgcccgcctggcgctggccttg
gcgctggcgagcatcctgagcggaccccccgctgctgcctgccccaccaagtgtacctgc
tccgccgctagcgtggactgccacgggctgggcctgcgcgccgttccccggggcatcccc
cgcaacgctgagcgccttgacctggacagaaataacatcaccaggatcaccaaaatggac
ttcaccggcttgaagaatctccgagtcttgcatctggaagacaatcaggtcagcgtcatc
gagagaggcgccttccaggatctgaagcagctggagcgattacgtctgaacaagaacaag
ctccaggtccttccagaattacttttccagagcacaccgaagctcaccagactagatctg
agcgaaaaccagatccagggcatcccgaggaaggcgttcaggggcgtcacgggcgtgaag
aacctgcaactggacaataaccacatcagctgcattgaagatggagccttccgagcgctg
cgcgatttggagatcctcacccttaacaacaacaacatcagccgtatcctggtcaccagc
ttcaaccacatgccgaagatccggaccctgcgtctccactccaaccacctgtactgtgat
tgtcacttggcctggctctcagactggctgcgacagcggcggaccattggccagttcacc
ctctgcatggcgcccgtgcacctgagaggcttcagtgtagcagacgtgcagaagaaggag
tatgtgtgtccaggtccccactcagaggctccagcctgcaatgccaactccctctcctgc
ccttctgcctgctcatgcagtaataacattgtagactgccgtgggaagggactgactgag
atccctgccaacctgccggagggcatcgtggaaatacgcctagaacagaactccatcaaa
tccattcctgcaggagctttcatccagtacaaaaaactgaagcgaatagacatcagcaag
aatcagatatcggacattgctccagatgccttccagggcctgaaatcactcacgtcgctg
gtgctctatgggaacaagatcacagagattcccaaaggactgtttgacgggctggtgtcc
ctgcagctgctcctcctcaatgccaacaagatcaactgcctgcgggtaaacaccttccag
gacctacagaacctcaatctgctctctctgtatgacaacaagttgcagactatcagcaaa
gggctctttgctccgctgcagtccatccagaccctccacttagctcaaaacccgtttgtt
tgcgactgccacttgaagtggttggccgactacctccaggacaaccccattgagacgagc
ggggcccgctgcagcagcccacgccggctggccaacaagcgcatcagccagatcaaaagc
aagaagttccgctgctcaggctcggaggattatcgcaacagattcagcagcgagtgcttc
atggacctagtgtgccccgagaagtgccgttgtgagggcaccattgtggactgctccaac
cagaagctctcccgcatcccgagccacctccctgaatataccactgacctgcgactgaac
gacaatgacatcgctgtgctggaggccactgggatcttcaagaagttgcccaacctgagg
aaaataaacttgagcaataataggatcaaggaggtgcgggagggtgcgtttgatggagcg
gcaggcgtgcaggaactgatgctgacggggaaccagctggagaccatgcacggacgcatg
ttccggggcctcagcggcctgaagacactgatgttaaggagcaacctgatcagctgcgta
aacaatgacaccttcgctggcctaagctctgtgagactgctgtccctctatgacaatcgg
atcaccaccatcagccctggagccttcaccacgctcgtctccctgtccaccataaacctc
ttgtctaaccctttcaactgcaactgtcacatggcctggctcggccggtggctgaggaaa
cgccgcatcgtaagcgggaaccccagatgtcagaagccctttttcctcaaggagattcct
atccaagatgtggccatccaggacttcacctgtgaaggcaatgaagagaacagctgtcag
ctgagtccacgctgccccgagcagtgtacctgtgtggagacagtggtgcgatgcagcaac
aggggtctccacaccctccccaagggcatgccaaaggacgtgactgaactgtacctggaa
ggaaatcatttaacggcggtgcccaaagaattgtccaccttccgacagctgacactaatt
gacctgagcaacaacagcatcagtatgctgaccaatcacaccttcagcaacatgtcccac
ctctccacactgatcctgagctacaaccggctgagatgcatcccggtccatgccttcaac
gggctaaggtcactccgagtgctaaccctccatggcaatgacatttccagtgttcctgaa
ggctccttcaatgatctgacgtccctctcccacctggccctgggaatcaaccctctccac
tgtgactgcagtctgcgttggttatcagagtggataaaggctgggtacaaggagcctggc
attgccagatgcagtagccccgagtccatggcagacagactcctgctcaccacccccacc
cacaggttccagtgcaaagggccagtggacattaacatcgtggccaagtgcaacgcctgc
ctctctagcccatgcaagaacaacggcacttgcagccaggatccggtggagcagtaccgc
tgtacctgcccttacagctacaagggcaaggactgcaccgtgcccatcaacacctgcgtc
cagaacccctgtcagcacggaggcacctgtcacctcagtgagagccacagagatgggttc
agctgctcctgccccctgggctttgagggacagcggtgtgagatcaacccagatgactgt
gaggataacgactgtgaaaacagcgccacctgtgtggacgggatcaacaactacgcatgc
gtgtgcccgccgaactacacaggggagctgtgtgatgaggtgattgactactgcgtgccc
gagatgaacctctgtcagcacgaggccaagtgcatctccctggacaaaggattcaggtgc
gaatgtgtccctggctacagtggaaagctgtgcgagacagacaacgatgactgtgtggct
cacaagtgtcgccacggagcccagtgtgtggacgcggtcaatggctacacgtgcatctgc
ccccagggcttcagcgggctcttctgtgagcaccccccacccatggttctgctacagacc
agcccctgtgaccagtacgagtgccagaatggggcgcagtgcatcgtggtacagcaggag
cccacttgccgctgtcccccaggcttcgctgggcccaggtgtgagaagctcatcactgtg
aatttcgtgggcaaggactcctatgtggaactggcctctgccaaggtccggccccaggcc
aacatctccctgcaggtggccactgacaaggacaacggcatccttctttacaagggagac
aacgaccccctggcactggagctgtaccagggtcacgtgaggctggtgtatgacagcctg
agctcccctccgaccacggtgtacagtgtggagacggtgaatgatggccagtttcacagt
gtggagctggtgatgctaaaccagaccctgaacctggtggtagacaaaggagcccccaag
agcctggggaagctccagaagcagccagcagtgggcatcaacagtcccctctatcttgga
ggcatccccacgtctacaggcctctcagccttacgccagggtgcagacaggccgctgggc
ggcttccacggctgtatacacgaagtgcgcatcaacaacgagttgcaggatttcaaagcc
ctcccaccccagtccctgggggtctctcccggctgcaaatcctgcactgtgtgtcgtcac
ggcctgtgtcgttccgtggagaaggacagcgtagtgtgtgagtgccatccgggatggact
ggtccactgtgtgatcaggaagcccaggacccctgccttggtcacagctgcagccatggg
acatgcgtggcgactggcaactcatatgtgtgcaagtgtgccgagggctatgagggacct
ttgtgtgaccagaagaatgactctgccaatgcctgctcagccttcaagtgccaccacggg
cagtgccacatctcagatcgaggggagccctattgcctgtgccagcctggcttcagtggc
aatcactgtgagcaagagaatccatgtttgggagagatagtccgtgaagccatccgccgc
cagaaagattatgcctcctgtgccacagcatccaaggtgcccatcatggtatgccgcggg
ggctgcgggagccaatgctgccagccgattcggagcaagcggcggaaatacgtcttccag
tgcactgacggctcctcgttcgtggaagaggtggagagacacttggaatgtggctgtcgt
gagtgttcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (31)   

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