KEGG   Rattus norvegicus (rat): 83610
Entry
83610             CDS       T01003                                 
Symbol
Apba2
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 2
  KO
K20055  amyloid beta A4 precursor protein-binding family A member 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    83610 (Apba2)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Clathrin-mediated endocytosis
   LDLR adaptor proteins
    83610 (Apba2)
SSDB
Motif
Pfam: PID PDZ PDZ_6 PDZ_2 NRho
Other DBs
NCBI-GeneID: 83610
NCBI-ProteinID: NP_113968
RGD: 620845
Ensembl: ENSRNOG00000016358
UniProt: O35431 A6JBL8
Structure
Position
1:127465026..127698124
AA seq 750 aa
MAHRKRQSTASSMLDHRARPGPIPHDQEPENEDTELPLESYVPTGLELGTLRPDSPTPEE
QECHNHSPDGDSSSDYVNNTSEEEDYDEGLPEEEEGVTYYIRYCPEDDSYLEGMDCNGEE
YLAHGAHPVDTDECQEAVEDWTDSVGPHTHSHGAENSQEYPDSHLPIPEDDPTVLEVHDQ
EEDGHYCPSKESYQDYYPPETNGNTGGASPYRMRRGDGDLEEQEEDIDQIVAEIKMSLSM
TSITSASEASPEHMPELDPGDSTEACSPSDTGRGPSRQEARPKSLNLPPEVKHSGDPQRG
LKTKTRTPEERPKWPQEQVCNGLEQPRKQQRSDLNGPTDNNNIPETKKVASFPSFVAVPG
PCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANS
EGDAQTLTEVDLFISTQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARRRMPRSA
SQDCIETTPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLS
QKEYSDIINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILAN
MMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTT
VLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQA
LSNSVGEIHMKTMPAAMFRLLTGQETPLYI
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggcccaccgcaagcgccagagcactgcaagcagcatgttggaccacagggcccggcca
ggtcctatcccccatgaccaggagcctgagaatgaggatacagaactgcctctggagagc
tatgtacccacaggcctggagctaggcactctgagaccagacagccccacgcctgaggaa
caggagtgccacaaccatagccctgatggggactccagctctgactatgtgaacaacacg
tctgaggaggaggactatgacgagggcctccctgaggaggaggaaggtgtcacctactac
atccgctattgtcctgaggatgacagctacctggagggcatggactgtaatggggaggag
tacctagcccatggtgcacatcctgtggacactgatgagtgtcaggaggcggtagaggac
tggacggactcagtgggtcctcatactcatagccacggggctgaaaacagccaagagtat
ccagacagccacctgcctatcccagaggatgaccctactgtcctggaggtccatgaccag
gaagaagatggccactactgtcccagcaaggagagctaccaggactattatcccccagag
accaatgggaacacgggtggcgcttctccctatcgcatgaggcgtggggatggggaccta
gaggagcaggaggaagacatcgaccagatagtggctgagatcaagatgagcctgagcatg
accagtattaccagtgccagtgaggccagccctgagcacatgcctgagctggaccctggg
gactccactgaggcctgttcacccagtgacactggccgtggacccagtaggcaagaagcg
aggcccaagtcgctgaaccttccccctgaggttaagcactccggagacccccaaagagga
ctcaagaccaagaccaggaccccagaggagaggccaaagtggccccaagagcaggtttgc
aatggcttggaacagccgaggaagcagcagcgctctgatctcaatggacccactgacaat
aacaacatcccagagacaaagaaggtggcctcgtttccaagctttgtagctgttccaggg
ccctgtgagccagaagacctcatcgatggcatcatctttgcagccaactacctgggctcc
acccagctgctctctgagcgcaacccctccaaaaacatccgaatgatgcaagctcaagaa
gctgtcagcagggtcaagaggatgcagaaggctgctaagatcaagaaaaaagcgaattct
gagggtgatgctcagacactgacagaagtagacctcttcatttctacccagaggatcaaa
gtcttaaacgctgacacacaggaaaccatgatggaccatgccttgcgcaccatctcctac
attgcagacattgggaacatcgtggttctgatggccaggcgccgcatgcccaggtcagcc
tctcaggactgcatcgagaccacgcctggggcccaggaagggaagaagcagtacaagatg
atctgtcacgtgttcgagtcagaggatgcccagctgatagcccagtcaattgggcaggcc
ttcagtgtggcctaccaggagttcctgagggccaacggcatcaaccctgaggacctgagc
cagaaggaatacagtgatatcataaatacccaggagatgtataatgatgaccttatccac
ttctcaaactcggagaactgcaaggagctgcagctggagaagcacaagggtgagattttg
ggtgtggtggtcgtggagtcaggctggggctccatcctgcccactgtgatcctggcgaac
atgatgaacggcggcccagcagctcgctcggggaagctgagcattggcgaccagatcatg
tccatcaatggcaccagcctggtggggctgcccctcgctacctgccagggtatcatcaag
ggcctgaagaaccaaacacaggtaaagctcaacatcgtcagctgtcccccagtcaccaca
gtcctcatcaaacgtccagatctcaagtaccagctgggtttcagcgtgcaaaatggaatc
atttgcagcctcatgagagggggtattgcagagcgaggtggtgtccgagtcggccaccgt
atcatcgagatcaacggacagagtgtggtagccacagcccacgagaagatagtccaggct
ctgtctaactcagttggagagattcacatgaagaccatgcctgcagccatgttcaggctc
ctcacaggccaggagacaccgctgtacatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (17)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (16)   
   RefSeq(nuc) (14)   
   GenBank (1)   
   EMBL (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (5)   
   Pfam (5)   
All databases (49)   

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