KEGG   Rattus norvegicus (rat): 83616
Entry
83616             CDS       T01003                                 
Symbol
Trim3
Name
(RefSeq) tripartite motif-containing protein 3
  KO
K11997  tripartite motif-containing protein 2/3
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    83616 (Trim3)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    83616 (Trim3)
SSDB
Motif
Pfam: NHL Filamin DUF5128 SGL zf-B_box zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-RING_2 zf-C3HC4_2 SBBP Invasin_D3 zf-ANAPC11 CENP-F_leu_zip Baculo_PEP_C
Other DBs
NCBI-GeneID: 83616
NCBI-ProteinID: NP_113974
RGD: 70074
Ensembl: ENSRNOG00000018356
UniProt: O70277
Position
1:complement(169362751..169385430)
AA seq 744 aa
MAKREDSPGPEVQPMDKQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCP
VCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEG
KTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAI
ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLESICGAKQKVLQTQLDT
LRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVL
EVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSA
ELCAEITGPDGVRLAVPVVDHKNGTYELVYTARTEGDLLLSVLLYGQPVRGSPFRVRALR
PGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRG
REKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVA
VDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVF
TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFG
SHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLA
LTSDGHVVVADAGNHCFKAYRYLQ
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggcaaagagggaggacagccctggcccggaggtgcagccaatggacaagcagtttctg
gtatgcagtatctgcctggatcggtaccggtgccccaaagttctgccttgtctacacacc
ttctgcgaaagatgtctccagaactacatccctcctcagagcctgacactctcgtgtcca
gtatgccggcagacatccatcctcccagaacagggtgtctcagccctacaaaacaacttc
ttcatcagcagcctcatggaggccatgcagcaggcacctgatggggcccacgaccctgaa
gacccccaccccctcagcgcagtggctggccgccctctctcctgccccaaccatgaaggc
aagacgatggagttttactgtgaggcctgtgagactgccatgtgtggtgagtgccgcgca
ggggagcaccgtgaacacggcacagtgctgttgcgggacgtggtggagcagcacaaggca
gctctacagcgccagcttgaagctgtgcgtggccgattgccacagctgtctgcagctatc
gccttggttgggggcatcagccagcagctgcaagagcgcaaggcagaggccctggcccag
ataagtgcagcctttgaggacctggagcaagctctgcagcagcgcaagcaggctctggtc
agcgacttggagagcatttgtggggccaagcagaaggtgttgcagacacagttagacaca
ctgcgccagggtcaggaacacattggcagtagctgcagctttgcagagcaggcactgaga
ctgggctctgcccctgaggttttgctagtaagaaagcacatgcgagagaggctggctgct
ctggcagctcaggccttcccagaaaggccccatgagaatgcacagctggaactggtcctt
gaagtagatgggttgcggagatcggtgctcaatctgggtgcactgctcaccaccagtgct
actgcacacgagacagtggccaccggcgagggcctgcgccaggcactggttggccagcct
gcctcactcactgtcaccaccaaagacaaagatgggcggctggtgcgcacgggcagcgca
gagctgtgcgcagagatcactggccccgatggcgtgcgccttgcggtaccggtggtggac
cacaaaaatggcacatatgagctggtgtacacagcacgtacagaaggcgacctgctcctc
tcagtgctgctctatggacagccggtgcgtggcagccctttccgtgtgcgtgccctgaga
cccggagacttgccaccttccccagatgatgtgaagcgccgggtcaagtctcccggtggt
cctggcagtcatgtgcgccagaaggcagtgcgtaggccgagctccatgtacagcaccggt
ggcaaacggaaagacaatccaattgaggatgaactcgtctttcgtgttggcagtcgtgga
agggagaaaggtgaattcaccaatttacagggcgtgtccgctgctagcagtggccgaata
gtggtagcagacagcaacaaccaatgtattcaggttttctccaatgagggccagttcaag
ttccgatttggagtccgtgggcgctcgcctgggcaactacagcgtcctacgggtgtggca
gtggacaccaatggagacattattgtggcagactatgacaaccgttgggtcagcatcttc
tctcctgagggcaagttcaagaccaaaattggagctggccgcctcatggggcccaaggga
gtggctgtggaccggaatgggcatatcattgtagtggataacaagtcttgctgtgtcttc
accttccagcccaatggcaagcttgttgggcgttttggaggccgtggggccactgaccgc
cacttcgcagggccccactttgtggctgtgaacaacaagaatgagattgtagtaacggat
ttccacaaccattcagtgaaggtgtacagtgctgatggagagttcctcttcaaatttggc
tcacatggcgagggcaatggacagttcaatgcccccacgggagtagctgtggattccaat
ggaaacatcatcgtggctgactggggcaatagtcgcatacaggtattcgacagctctggt
tccttcctgtcctatatcaacacgtctgcagagccactgtatggcccacagggcttggca
ttgacctcggatggccacgtagtagtggctgatgctggcaaccactgctttaaggcctat
cgatacctccagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (41)   

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