KEGG   Rattus norvegicus (rat): 83632
Entry
83632             CDS       T01003                                 
Symbol
Deaf1
Name
(RefSeq) deformed epidermal autoregulatory factor 1 homolog
  KO
K23041  deformed epidermal autoregulatory factor 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    83632 (Deaf1)
   03019 Messenger RNA biogenesis [BR:rno03019]
    83632 (Deaf1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   SAND domain-containing proteins
    83632 (Deaf1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     83632 (Deaf1)
SSDB
Motif
Pfam: SAND zf-MYND DUF5649
Other DBs
NCBI-GeneID: 83632
NCBI-ProteinID: NP_113989
RGD: 620671
Ensembl: ENSRNOG00000017960
UniProt: F1LQ17
Position
1:complement(205831428..205865106)
AA seq 565 aa
MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAESEAEEPVLSRDEDSEEDADSEAERET
RRVTAVAVMAAESGHMDMGTEALPSPDEAAAAAAFAEVTTVTVANVGSSADNVFTTSVAN
AASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIVETTGLKGPAAPLTPGPQSPPTP
LAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKSRLGSGGRGRCIKQGENWYSPTEF
EAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDDMTLSGPVRLFVPY
KRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVEATAV
ISESPAQGDVFAGATVQEAGVQPPCRVGHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVL
TSLPALAVPPSTPTKAVSPTVVSGLEMSEHRSWLYLEEMVNSLLNTAQQLKTLFEQAKQA
SSCREAAVTQARMQVDAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHVC
GQSASVTVQADDVHVEESVIEKVTV
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggaggactcggactcggcggcaaaacagctgggcctggccgaggcggcagcggtggcg
gccgctgccgctgtggcggcggccgccgcggccgcagcggaaagcgaggcggaggagccg
gtgttaagcagagacgaggactcggaggaggacgcagactccgaggcggagcgcgagacg
cggcgggtcacggctgtggcggtgatggcggccgaatctgggcacatggatatgggtacc
gaggctctgcccagccctgatgaggccgccgccgccgccgcctttgcagaagtgaccaca
gtgactgtggccaacgtggggtcctctgcagataacgtcttcacaacatcagtggcaaat
gcagcctcgatatcaggacatgtcctgtctggtaggacagccctgcagatcggggacagc
ctgaacactgagaaagccacactaatagttgtacacacagatgggagcattgtggaaacc
accgggctgaagggcccagcagcacctctcaccccaggtcctcagtctcctcctacccca
ctggcacctggccaggagaaaggtggtaccaagtacaactgggacccttcggtgtatgac
agcgagctgcctgtgcgctgtcggaacatcagtggcacgctctacaagagtcggctcggc
tcaggtggccgggggcggtgtatcaagcagggagaaaactggtacagcccaaccgagttt
gaagccatggcaggaagagccagcagcaaggactggaagagaagcatccgctatgcgggc
agacccctgcagtgcctcatccaggatggtattttgaaccctcacgctgcctcctgcacc
tgtgctgcctgttgcgatgacatgactctaagtggccctgtcaggctcttcgtcccctat
aaaaggcgcaagaaagagaatgagctgcccacgactccagttaagaaggattcccccaag
aacatcacgctgctccctgccacggcggccaccaccttcactgtgacaccctcaggacag
atcactacctctggagcactaacctttgaccgagcatccactgtggaggccactgctgtc
atctctgagagcccagcccaaggggatgtctttgcaggagccacagtgcaagaggcaggc
gtgcagcccccctgcagggttggccaccctgaaccccactaccctggctatcaggacagc
tgccagatcgccccgtttccagaagctgcattgccaacatcacatcccaaaattgtcctg
acatcgctgcccgccttggccgtgccgccctccacccccaccaaagctgtctctcccacc
gtggtcagtgggctggagatgtcagagcatcggagctggctgtacctggaagagatggtc
aactccctcctcaacacagcccagcagctgaagacgttgtttgaacaagccaagcaggcg
agctcttgcagggaagctgctgtgacccaggcgagaatgcaggttgatgcagagaggaag
gagcagtcatgtgtcaactgcggccgggaggccatgagtgagtgcaccggctgccacaag
gttaactactgctctacgttctgccagcgcaaggactggaaagaccatcagcatgtatgt
ggccagtcagcatctgtcactgtccaggctgatgacgtccatgttgaagaaagtgtgata
gaaaaagttactgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (15)   
   RefSeq(nuc) (11)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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