KEGG   Rattus norvegicus (rat): 83730
Entry
83730             CDS       T01003                                 
Symbol
Vamp8
Name
(RefSeq) vesicle-associated membrane protein 8
  KO
K08512  vesicle-associated membrane protein 8
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04130  SNARE interactions in vesicular transport
rno04140  Autophagy - animal
rno04611  Platelet activation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    83730 (Vamp8)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    83730 (Vamp8)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    83730 (Vamp8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    83730 (Vamp8)
Membrane trafficking [BR:rno04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    83730 (Vamp8)
SSDB
Motif
Pfam: Synaptobrevin RIFIN Ferlin_C Prominin Baculo_F EVI2A MCU DUF3671 Orf78 Presenilin Sec20 DUF6584 DUF5345 YukC RNF152_C DUF4795 CD34_antigen ODV-E18 PRIMA1 DUF6548 DUF3619 Pox_EPC_I2-L1 EMP24_GP25L
Other DBs
NCBI-GeneID: 83730
NCBI-ProteinID: NP_114015
RGD: 620421
Ensembl: ENSRNOG00000012748
UniProt: Q9WUF4 A6IAB7
Structure
Position
4:complement(106000570..106011081)
AA seq 100 aa
MEASGSAGNDRVRNLQSEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTT
SQKVARKFWWKNVKMIVIICVIVLIILILIILFATGTIPT
NT seq 303 nt   +upstreamnt  +downstreamnt
atggaggccagtgggagtgccggaaatgaccgagtcaggaacctgcagagtgaggtggag
ggagtcaagaatattatgacccagaatgtggagcggatcttggcccgaggggagaacctg
gaccatctccgaaacaagacagaggacttggaagccacgtctgaacacttcaagacgacg
tcccagaaggtggcccggaagttctggtggaagaatgtgaagatgattgtcatcatctgt
gtgattgtccttatcattctcatcctcatcatactctttgctacgggcaccatccccact
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (23)   
   Pfam (23)   
All databases (45)   

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