KEGG   Rattus norvegicus (rat): 83765
Entry
83765             CDS       T01003                                 
Symbol
Rtn4
Name
(RefSeq) reticulon-4
  KO
K20720  reticulon-4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05010  Alzheimer disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    83765 (Rtn4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    83765 (Rtn4)
   03036 Chromosome and associated proteins [BR:rno03036]
    83765 (Rtn4)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    83765 (Rtn4)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    83765 (Rtn4)
SSDB
Motif
Pfam: Reticulon DUF639
Other DBs
NCBI-GeneID: 83765
NCBI-ProteinID: NP_114019
RGD: 620989
Ensembl: ENSRNOG00000004621
UniProt: Q9JK11
Position
14:107651001..107698610
AA seq 1163 aa
MEDIDQSSLVSSSTDSPPRPPPAFKYQFVTEPEDEEDEEEEEDEEEDDEDLEELEVLERK
PAAGLSAAAVPPAAAAPLLDFSSDSVPPAPRGPLPAAPPAAPERQPSWERSPAAPAPSLP
PAAAVLPSKLPEDDEPPARPPPPPPAGASPLAEPAAPPSTPAAPKRRGSGSVDETLFALP
AASEPVIPSSAEKIMDLMEQPGNTVSSGQEDFPSVLLETAASLPSLSPLSTVSFKEHGYL
GNLSAVSSSEGTIEETLNEASKELPERATNPFVNRDLAEFSELEYSEMGSSFKGSPKGES
AILVENTKEEVIVRSKDKEDLVCSAALHSPQESPVGKEDRVVSPEKTMDIFNEMQMSVVA
PVREEYADFKPFEQAWEVKDTYEGSRDVLAARANVESKVDRKCLEDSLEQKSLGKDSEGR
NEDASFPSTPEPVKDSSRAYITCASFTSATESTTANTFPLLEDHTSENKTDEKKIEERKA
QIITEKTSPKTSNPFLVAVQDSEADYVTTDTLSKVTEAAVSNMPEGLTPDLVQEACESEL
NEATGTKIAYETKVDLVQTSEAIQESLYPTAQLCPSFEEAEATPSPVLPDIVMEAPLNSL
LPSAGASVVQPSVSPLEAPPPLSYDSIKLEPENPPPYEEAMNVALKALGTKEGIKEPESF
NAAVQETEAPYISIACDLIKETKLSTEPSPDFSNYSEIAKFEKSVPEHAELVEDSSPESE
PVDLFSDDSIPEVPQTQEEAVMLMKESLTEVSETVAQHKEERLSASPQELGKPYLESFQP
NLHSTKDAASNDIPTLTKKEKISLQMEEFNTAIYSNDDLLSSKEDKIKESETFSDSSPIE
IIDEFPTFVSAKDDSPKLAKEYTDLEVSDKSEIANIQSGADSLPCLELPCDLSFKNIYPK
DEVHVSDEFSENRSSVSKASISPSNVSALEPQTEMGSIVKSKSLTKEAEKKLPSDTEKED
RSLSAVLSAELSKTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLS
VTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRL
FLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLA
NKSVKDAMAKIQAKIPGLKRKAD
NT seq 3492 nt   +upstreamnt  +downstreamnt
atggaagacatagaccagtcgtcgctggtctcctcgtccacggacagcccgccccggcct
ccgcccgccttcaagtaccagttcgtgacggagcccgaggacgaggaggacgaggaggag
gaggaggacgaggaggaggacgacgaggacctagaggaactggaggtgctggagaggaag
cccgcagccgggctgtccgcagctgcggtgccgcccgccgccgccgcgccgctgctggac
ttcagcagcgactcggtgccccccgcgccccgcgggccgctgccggccgcgccccctgcc
gctcctgagaggcagccatcctgggaacgcagccccgcggcgcccgcgccatccctgccg
cccgctgccgcagtcctgccctccaagctcccagaggacgacgagcctccggcgaggccc
ccgcctccgccgccagccggcgcgagccccctggcggagcccgccgcgcccccttccacg
ccggccgcgcccaagcgcaggggctccggctcagtggatgagaccctttttgctcttcct
gctgcatctgagcctgtgataccctcctctgcagaaaaaattatggatttgatggagcag
ccaggtaacactgtttcgtctggtcaagaggatttcccatctgtcctgcttgaaactgct
gcctctcttccttctctatctcctctctcaactgtttcttttaaagaacatggatacctt
ggtaacttatcagcagtgtcatcctcagaaggaacaattgaagaaactttaaatgaagct
tctaaagagttgccagagagggcaacaaatccatttgtaaatagagatttagcagaattt
tcagaattagaatattcagaaatgggatcatcttttaaaggctccccaaaaggagagtca
gccatattagtagaaaacactaaggaagaagtaattgtgaggagtaaagacaaagaggat
ttagtttgtagtgcagcccttcacagtccacaagaatcacctgtgggtaaagaagacaga
gttgtgtctccagaaaagacaatggacatttttaatgaaatgcagatgtcagtagtagca
cctgtgagggaagagtatgcagactttaagccatttgaacaagcatgggaagtgaaagat
acttatgagggaagtagggatgtgctggctgctagagctaatgtggaaagtaaagtggac
agaaaatgcttggaagatagcctggagcaaaaaagtcttgggaaggatagtgaaggcaga
aatgaggatgcttctttccccagtaccccagaacctgtgaaggacagctccagagcatat
attacctgtgcttcctttacctcagcaaccgaaagcaccacagcaaacactttccctttg
ttagaagatcatacttcagaaaataaaacagatgaaaaaaaaatagaagaaaggaaggcc
caaattataacagagaagactagccccaaaacgtcaaatcctttccttgtagcagtacag
gattctgaggcagattatgttacaacagataccttatcaaaggtgactgaggcagcagtg
tcaaacatgcctgaaggtctgacgccagatttagttcaggaagcatgtgaaagtgaactg
aatgaagccacaggtacaaagattgcttatgaaacaaaagtggacttggtccaaacatca
gaagctatacaagaatcactttaccccacagcacagctttgcccatcatttgaggaagct
gaagcaactccgtcaccagttttgcctgatattgttatggaagcaccattaaattctctc
cttccaagcgctggtgcttctgtagtgcagcccagtgtatccccactggaagcacctcct
ccacttagttatgacagtataaagcttgagcctgaaaaccccccaccatatgaagaagcc
atgaacgtagcactaaaagctttgggaacaaaggaaggaataaaagagcctgaaagtttt
aatgcagctgttcaggaaacagaagctccttatatatccattgcgtgtgatttaattaaa
gaaacaaagctctccactgagccaagtccagatttctctaattattcagaaatagcaaaa
ttcgagaagtcggtgcccgaacacgctgagctagtggaggattcctcacctgaatctgaa
ccagttgacttatttagtgatgattcgattcctgaagtcccacaaacacaagaggaggct
gtgatgctcatgaaggagagtctcactgaagtgtctgagacagtagcccagcacaaagag
gagagacttagtgcctcacctcaggagctaggaaagccatatttagagtcttttcagccc
aatttacatagtacaaaagatgctgcatctaatgacattccaacattgaccaaaaaggag
aaaatttctttgcaaatggaagagtttaatactgcaatttattcaaatgatgacttactt
tcttctaaggaagacaaaataaaagaaagtgaaacattttcagattcatctccgattgag
ataatagatgaatttcccacgtttgtcagtgctaaagatgattctcctaaattagccaag
gagtacactgatctagaagtatccgacaaaagtgaaattgctaatatccaaagcggggca
gattcattgccttgcttagaattgccctgtgacctttctttcaagaatatatatcctaaa
gatgaagtacatgtttcagatgaattctccgaaaataggtccagtgtatctaaggcatcc
atatcgccttcaaatgtctctgctttggaacctcagacagaaatgggcagcatagttaaa
tccaaatcacttacgaaagaagcagagaaaaaacttccttctgacacagagaaagaggac
agatccctgtcagctgtattgtcagcagagctgagtaaaacttcagttgttgacctcctc
tactggagagacattaagaagactggagtggtgtttggtgccagcttattcctgctgctg
tctctgacagtgttcagcattgtcagtgtaacggcctacattgccttggccctgctctcg
gtgactatcagctttaggatatataagggcgtgatccaggctatccagaaatcagatgaa
ggccacccattcagggcatatttagaatctgaagttgctatatcagaggaattggttcag
aaatacagtaattctgctcttggtcatgtgaacagcacaataaaagaactgaggcggctt
ttcttagttgatgatttagttgattccctgaagtttgcagtgttgatgtgggtgtttact
tatgttggtgccttgttcaatggtctgacactactgattttagctctgatctcactcttc
agtattcctgttatttatgaacggcatcaggtgcagatagatcattatctaggacttgca
aacaagagtgttaaggatgccatggccaaaatccaagcaaaaatccctggattgaagcgc
aaagcagattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (40)   
   RefSeq(nuc) (4)   
   GenBank (18)   
   EMBL (18)   
Protein domain (2)   
   Pfam (2)   
All databases (59)   

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