KEGG   Rattus norvegicus (rat): 83809
Entry
83809             CDS       T01003                                 
Symbol
Nsfl1c
Name
(RefSeq) NSFL1 cofactor p47
  KO
K14012  UBX domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    83809 (Nsfl1c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    83809 (Nsfl1c)
Membrane trafficking [BR:rno04131]
 SNARE
  SNARE associated proteins
   Others
    83809 (Nsfl1c)
SSDB
Motif
Pfam: SEP UBX UBA_4 Spt20_SEP TAP_C
Other DBs
NCBI-GeneID: 83809
NCBI-ProteinID: NP_114187
RGD: 619952
Ensembl: ENSRNOG00000008604
UniProt: O35987 A6KHI1
Structure
Position
3:160438708..160463261
AA seq 370 aa
MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSS
VSRGTAPSDNRVTSFRDLIHDQDEEEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVD
DLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGERRRHSGQDV
HVVLKLWKTGFSLDNGDLRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRD
EDFVKPKGAFKAFTGEGQKLGSTAPQVLNTSSPAQQAENEAKASSSILINEAEPTTNIQI
RLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELADENQTLKEANL
LNAVIVQRLT
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggcggaggagcggcaggacgcgttgagggagttcgtggcggtgacgggcgctgaggag
gaccgggcccgtttcttcttggagtcagctggctgggacctgcagattgcacttgcaagc
ttttatgaggatggaggggatgaagacattgtgaccatttcacaggcaaccccaagttca
gtgtccagaggcacagctcctagtgataatagagtaacatccttcagagacctcattcat
gaccaagatgaagaggaagaggaagaagagggacagaggttttatgctgggggctcagag
agaagtggacagcagattgttggtcctccccggaagaaaagtcccaacgagctggtggat
gatctgtttaagggtgccaaagagcatggggctgtagctgtggaacgagtgaccaagagc
cctggagagaccagtaaaccgagaccatttgcaggagggggctaccgccttggagcagca
ccagaagaggagtctgcctatgtggcaggagaaaggaggcggcattcaggccaggatgtt
catgtagtgctaaagctctggaaaactggattcagcctagacaatggtgaccttagaagc
taccaagacccatccaatgcccagtttctggagtctatccgtagaggggaggttcctgca
gagcttcggaggttagctcacggtgggcaggtgaacttggatatggaggatcatcgggac
gaggacttcgtgaagcccaagggagctttcaaagccttcactggcgagggccagaaacta
ggcagcacggccccgcaggttttaaacaccagctctccagcccagcaagcagaaaatgaa
gccaaagctagctcgtccatcttaatcaatgaggcagaacctaccacgaacatccaaatc
cgactggcagatggcgggagactggtgcagaaattcaaccacagccacaggatcagcgac
atccggctcttcatcgtggatgcacggccggctatggctgccaccagttttgtccttatg
actaccttccctaacaaagagctggctgatgagaaccaaaccctgaaggaagccaatctt
ctcaacgctgtcatcgtgcagcggttaacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
3D Structure (7)   
   PDB (7)   
Protein domain (5)   
   Pfam (5)   
All databases (39)   

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