KEGG   Rattus norvegicus (rat): 83810
Entry
83810             CDS       T01003                                 
Symbol
Trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
  KO
K05222  transient receptor potential cation channel subfamily V member 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04080  Neuroactive ligand-receptor interaction
rno04750  Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    83810 (Trpv1)
 09150 Organismal Systems
  09157 Sensory system
   04750 Inflammatory mediator regulation of TRP channels
    83810 (Trpv1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    83810 (Trpv1)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   83810 (Trpv1)
SSDB
Motif
Pfam: Ank_2 Ank Ion_trans Ank_3 Ank_5 Ank_4
Other DBs
NCBI-GeneID: 83810
NCBI-ProteinID: NP_114188
RGD: 628841
Ensembl: ENSRNOG00000019486
UniProt: O35433 A6HGJ0
Structure
Position
10:58349936..58375021
AA seq 838 aa
MEQRASLDSEESESPPQENSCLDPPDRDPNCKPPPVKPHIFTTRSRTRLFGKGDSEEASP
LDCPYEEGGLASCPIITVSSVLTIQRPGDGPASVRPSSQDSVSAGEKPPRLYDRRSIFDA
VAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVA
RKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTK
GRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVD
NTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEP
ECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNR
LLQDKWDRFVKRIFYFNFFVYCLYMIIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEIL
SVSGGVYFFFRGIQYFLQRRPSLKSLFVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVAS
MVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIE
DGKNNSLPMESTPHKCRGSACKPGNSYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFI
ILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKAF
RSGKLLQVGFTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGVKRTLSFSLRSG
RVSGRNWKNFALVPLLRDASTRDRHATQQEEVQLKHYTGSLKPEDAEVFKDSMVPGEK
NT seq 2517 nt   +upstreamnt  +downstreamnt
atggaacaacgggctagcttagactcagaggagtctgagtccccaccccaagagaactcc
tgcctggaccctccagacagagaccctaactgcaagccacctccagtcaagccccacatc
ttcactaccaggagtcgtacccggctttttgggaagggtgactcggaggaggcctctccc
ctggactgcccttatgaggaaggcgggctggcttcctgccctatcatcactgtcagctct
gttctaactatccagaggcctggggatggacctgccagtgtcaggccgtcatcccaggac
tccgtctccgctggtgagaagcccccgaggctctatgatcgcaggagcatcttcgatgct
gtggctcagagtaactgccaggagctggagagcctgctgcccttcctgcagaggagcaag
aagcgcctgactgacagcgagttcaaagacccagagacaggaaagacctgtctgctaaaa
gccatgctcaatctgcacaatgggcagaatgacaccatcgctctgctcctggacgttgcc
cggaagacagacagcctgaagcagtttgtcaatgccagctacacagacagctactacaag
ggccagacagcactgcacattgccattgaacggcggaacatgacgctggtgaccctcttg
gtggagaatggagcagatgtccaggctgcggctaacggggacttcttcaagaaaaccaaa
gggaggcctggcttctactttggtgagctgcccctgtccctggctgcgtgcaccaaccag
ctggccattgtgaagttcctgctgcagaactcctggcagcctgcagacatcagcgcccgg
gactcagtgggcaacacggtgcttcatgccctggtggaggtggcagataacacagttgac
aacaccaagttcgtgacaagcatgtacaacgagatcttgatcctgggggccaaactccac
cccacgctgaagctggaagagatcaccaacaggaaggggctcacgccactggctctggct
gctagcagtgggaagatcggggtcttggcctacattctccagagggagatccatgaaccc
gagtgccgacacctatccaggaagttcaccgaatgggcctatgggccagtgcactcctcc
ctttatgacctgtcctgcattgacacctgtgaaaagaactcggttctggaggtgatcgct
tacagcagcagtgagacccctaaccgtcatgacatgcttctcgtggaacccttgaaccga
ctcctacaggacaagtgggacagatttgtcaagcgcatcttctacttcaacttcttcgtc
tactgcttgtatatgatcatcttcaccgcggctgcctactatcggcctgtggaaggcttg
cccccctataagctgaaaaacaccgttggggactatttccgagtcaccggagagatcttg
tctgtgtcaggaggagtctacttcttcttccgagggattcaatatttcctgcagaggcga
ccatccctcaagagtttgtttgtggacagctacagtgagatacttttctttgtacagtcg
ctgttcatgctggtgtctgtggtactgtacttcagccaacgcaaggagtatgtggcttcc
atggtgttctccctggccatgggctggaccaacatgctctactatacccgaggattccag
cagatgggcatctatgctgtcatgattgagaagatgatcctcagagacctgtgccggttt
atgttcgtctacctcgtgttcttgtttggattttccacagctgtggtgacactgattgag
gatgggaagaataactctctgcctatggagtccacaccacacaagtgccgggggtctgcc
tgcaagccaggtaactcttacaacagcctgtattccacatgtctggagctgttcaagttc
accatcggcatgggcgacctggagttcactgagaactacgacttcaaggctgtcttcatc
atcctgttactggcctatgtgattctcacctacatccttctgctcaacatgctcattgct
ctcatgggtgagaccgtcaacaagattgcacaagagagcaagaacatctggaagctgcag
agagccatcaccatcctggatacagagaagagcttcctgaagtgcatgaggaaggccttc
cgctctggcaagctgctgcaggtggggttcactcctgacggcaaggatgactaccggtgg
tgtttcagggtggacgaggtaaactggactacctggaacaccaatgtgggtatcatcaac
gaggacccaggcaactgtgagggcgtcaagcgcaccctgagcttctccctgaggtcaggc
cgagtttcagggagaaactggaagaactttgccctggttccccttctgagggatgcaagc
actcgagatagacatgccacccagcaggaagaagttcaactgaagcattatacgggatcc
cttaagccagaggatgctgaggttttcaaggattccatggtcccaggggagaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
3D Structure (47)   
   PDB (47)   
Protein domain (6)   
   Pfam (6)   
All databases (83)   

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