KEGG   Rattus norvegicus (rat): 83841
Entry
83841             CDS       T01003                                 
Symbol
Sdcbp
Name
(RefSeq) syntenin-1
  KO
K17254  syntenin-1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    83841 (Sdcbp)
Exosome [BR:rno04147]
 Exosomal proteins
  Proteins found in most exosomes
   83841 (Sdcbp)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 83841
NCBI-ProteinID: NP_114192
RGD: 621497
Ensembl: ENSRNOG00000009683
UniProt: Q9JI92
Structure
Position
5:24245279..24314712
AA seq 300 aa
MSLYPSLEDLKVDKVIQAQTASSANPASQAFFLNVVDSAAFPPGGNLYPKLYPELSQYMG
LSLSEAEICENMPVVSGAPTQGQLVARPSSVNYMVAPVTGNDAGIRRAEIKQGIREVILC
KDQDGKIGLRLKSVDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVL
KQAFGEKITMTIRDRPFERTVTMHKDSSGHVGFIFKSGKITSIVKDSSAARNGLLTDHHI
CEINGQNVIGLKDAQIADILSTAGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV
NT seq 903 nt   +upstreamnt  +downstreamnt
atgtctctctatccatctcttgaagatttgaaggtagacaaagtaattcaggctcaaact
gcctcttctgctaatcctgccagccaggccttttttttaaatgtggtcgattctgctgcc
ttccctccaggtggaaatctctatcctaaactgtatccagaactctctcaatacatggga
ctgtctttaagtgaagctgaaatatgtgaaaacatgcctgtggtctctggagcgccaacc
caagggcagttggtagcaaggccatccagtgtgaactacatggtagcacctgtgacaggt
aacgatgcggggattaggagagcagagattaagcaagggattcgggaagtcattttgtgt
aaggatcaagatggaaaaattgggctcagactgaagtcagtagataatggtatatttgtt
caactagtccaggctaattccccagcctccttggttgggctgcgatttggggaccaggtg
ctccagatcaatggtgaaaactgtgccggctggagctccgataaggcacacaaggtgctc
aagcaggcctttggagagaagattaccatgaccattcgtgatagaccctttgaacggaca
gttaccatgcataaggacagcagtggacatgttggctttatctttaaaagtggaaaaatc
acatccatagtgaaagacagttctgctgccagaaacggccttctcactgatcaccacatc
tgtgagatcaacggacagaacgtcattggcttgaaggatgctcagattgcagatatactg
tcaacagctgggactgtggtcaccatcacaatcatgcctgcctttatcttcgaacatatt
attaaacggatggctcccagcattatgaaaagcctgatggatcacaccattcctgaagtt
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (17)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (15)   
DNA sequence (27)   
   RefSeq(nuc) (15)   
   GenBank (6)   
   EMBL (6)   
3D Structure (4)   
   PDB (4)   
Protein domain (3)   
   Pfam (3)   
All databases (60)   

Download RDF
DBGET integrated database retrieval system