KEGG   Rattus norvegicus (rat): 84046
Entry
84046             CDS       T01003                                 
Symbol
Sox11
Name
(RefSeq) transcription factor SOX-11
  KO
K09268  transcription factor SOX11/12 (SOX group C)
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    84046 (Sox11)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    84046 (Sox11)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 84046
NCBI-ProteinID: NP_445801
RGD: 69351
Ensembl: ENSRNOG00000030034
UniProt: P0C1G9 A6HB03
Position
6:complement(49736773..49738794)
AA seq 395 aa
MVQQAESSEAESNLPRDALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKTDPAAKPSAGQSPDKSAAGAKAAKGPGKKCAKLKAPAGKAGAGKAAQPGDCGAGK
AAKCVFLDDDDEEDDEDDELQLRPKPDADDDDDEPAHSHLLPPPAQQQPPQLLRRYSVAK
VPASPTLSSAAESPEGASLYDEVRAGGRLYYSFKNITKQQPPPAPPALSPASSRCVSTSS
SSGSSSGSGAEDADDLMFDLSLNFSQGAHSACEQPLGAGAAGNLSLSLVDKDLDSFSEGS
LGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggtgcagcaggccgagagctcggaagccgagagcaacctgccccgggacgcgctggac
accgaggagggcgagttcatggcgtgcagcccggtggccctggatgagagcgacccggac
tggtgcaagacggcgtcgggccacatcaaacggcccatgaacgccttcatggtgtggtcc
aagatcgagcgcaggaagatcatggagcagtcgcccgacatgcataacgccgagatctcc
aagaggctgggcaagcgttggaagatgctgaaggacagcgagaagatcccgttcatccgg
gaggcggagcgcctgcgcctcaagcacatggctgattatcccgactacaagtaccggccg
cgcaaaaagcccaagacggacccagccgccaagcccagcgcgggccagagcccggacaag
agcgcggcgggcgctaaggcagccaagggcccgggcaagaagtgcgccaagctcaaggcg
cctgcgggcaaggcgggcgcaggcaaggcggcgcagcctggggactgcggcgcgggcaag
gcagccaagtgcgtcttcctggacgacgatgatgaagaggacgacgaggacgacgagctg
cagctacggcccaagccggacgcagacgacgacgacgacgagcccgcgcactcgcacctg
ctgccgccaccggcgcagcagcagccccctcagctgctgaggcgctacagcgtggccaag
gtgcccgccagccccacgctcagcagtgccgccgagtcccccgagggcgcgagcctgtac
gacgaagtgcgcgcgggcggccggctctactacagcttcaagaacatcaccaagcagcag
cctccgcccgcgcctcccgcgctgtcgcccgcgtcctcgcgctgcgtgtccacctcctca
tccagcggcagcagcagcggcagcggcgccgaggatgccgacgacctcatgttcgacctg
agcttgaatttctcccagggcgcgcacagcgcctgcgagcagccactgggcgcgggagcg
gcggggaacctgtccctgtcgctggtggataaggacctggattccttcagcgagggcagc
ctgggctcccacttcgagttccccgactactgcacgccggagctgagcgagatgatcgcg
ggggactggctggaggcgaacttctccgacctggtgttcacgtattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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