KEGG   Rattus norvegicus (rat): 84382
Entry
84382             CDS       T01003                                 
Symbol
Tcf4
Name
(RefSeq) transcription factor 4
  KO
K15603  transcription factor 4/12
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    84382 (Tcf4)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Ubiquitous (class A) factors
    84382 (Tcf4)
SSDB
Motif
Pfam: HLH
Other DBs
NCBI-GeneID: 84382
NCBI-ProteinID: NP_445821
RGD: 69271
Ensembl: ENSRNOG00000012405
UniProt: Q62655
Position
18:65216840..65563186
AA seq 664 aa
MHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWG
NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRENVQGC
HQSLLGGDMDMGNPGTLSPTKPGSQYYPYSSNNARRRPLHSSTMEVQTKKVRKVPPGLPS
SVYAPSASTADYNRDSPGYSSSKPAASTFSSSFFMQDGHHSSDPWSSSSGMNQPGYGGML
GNSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGT
DSIMANRGTGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWS
RNGGQASSSPNYEGPLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAVPGGHGDMHGIIG
PSHNGAMGSLGSGYGTGLLSANRHSLMVGAHREDGVALRGSHSLLPNQVPVPQLPVQSAT
SPDLNPPQDPYRGMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKS
ITSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTK
LLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDAANH
MGQM
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgcatcaccaacagcgaatggctgccttagggacggacaaagagctgagtgatttactg
gatttcagtgcgatgttttcgcctcctgtaagcagtgggaaaaatggaccaacttctttg
gcgagtggacattttacgggctcaaatgtagaagacagaagtagctcagggtcctggggg
aatggaggtcatccaagcccgtccaggaactatggagatgggactccctatgaccacatg
actagcagggatcttgggtcacatgacaatctctctccaccttttgtcaattccagaata
caaagtaaaacagaaaggggttcatactcatcttatgggagagaaaacgtacagggttgc
caccagagtctcctcggaggggacatggatatgggcaacccaggaaccctttcgcccacc
aaacctggctcccagtactacccatattccagcaataacgcccgacggaggcctcttcac
agtagtaccatggaggtgcagacaaagaaagtcagaaaagttcctccaggcttgccatct
tcagtctacgctccttcagccagcactgccgactacaacagggactcaccaggctattct
tcctccaagccagcagccagcactttctccagctccttcttcatgcaagatggccatcac
agcagtgacccttggagctcctccagtggaatgaatcagcccggctatggagggatgcta
ggcaactctcatatcccacagtctagcagctactgtagcctgcatccacatgaacgtctg
agctatccatcgcactcctcggcagacatcaactccagtcttcctccgatgtccacgttc
catcgaagtggcacaaaccattacagcacctcttcctgcacacctcctgccaacggaaca
gacagtataatggcaaacagaggaactggggcagcaggcagctcccagactggagacgct
ctggggaaagccctggcttcgatctattctcctgatcacacgaacaacagcttctcctcc
aacccttcaactcctgttggctcccctccttcactctcagcaggcacagctgtttggtct
cgaaacggaggacaggcctcgtcatctcccaattacgaaggacccttgcactccttgcag
agccgaattgaagaccgtttagaaagactggacgacgcgattcatgttctccggaaccac
gcggtgggcccatccacagctgtgcccggtggccatggggacatgcatgggatcatcgga
ccctctcacaatggagcaatgggcagtctgggctcaggatatggaactggccttctctca
gccaacagacattcactcatggtcggggcccaccgtgaagatggcgtggcactgagaggc
agccattctctcctgccaaaccaggttccggttccacagcttccagtccagtctgcaact
tcccctgacttgaacccaccccaagacccttacagagggatgccaccaggcctccaggga
cagagtgtgtcttccggcagctctgagatcaagtccgacgacgagggcgatgagaaccta
caggacacaaaatcttccgaggacaagaaactagacgacgacaagaaggatatcaaatca
attactagcaataacgatgatgaggacctgaccccggagcagaaggccgagcgtgagaag
gagcggaggatggccaataacgcccgtgagcgcctgagggtccgtgatatcaacgaggct
ttcaaggagctgggccgcatggtacagctccacctgaagagcgacaagccccagaccaag
ctcctgattctccaccaggcagtggctgtcatcctcagcctggagcagcaagtgcgagaa
aggaacctgaacccaaaagctgcctgtctgaaaagaagggaggaagagaaggtgtcctca
gagcctcccccgctctccttggctggcccacaccctgggatgggagacgcagcgaatcac
atgggtcagatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (39)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (37)   
DNA sequence (53)   
   RefSeq(nuc) (37)   
   GenBank (8)   
   EMBL (8)   
Protein domain (1)   
   Pfam (1)   
All databases (102)   

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