KEGG   Rattus norvegicus (rat): 84471
Entry
84471             CDS       T01003                                 
Symbol
Snx1
Name
(RefSeq) sorting nexin-1
  KO
K17917  sorting nexin-1/2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    84471 (Snx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    84471 (Snx1)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    84471 (Snx1)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    84471 (Snx1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   84471 (Snx1)
SSDB
Motif
Pfam: Vps5 Sorting_nexin PX BAR_3_WASP_bdg HR1
Other DBs
NCBI-GeneID: 84471
NCBI-ProteinID: NP_445863
RGD: 68935
Ensembl: ENSRNOG00000017029
UniProt: Q99N27 A6J5H5
Position
8:complement(75515780..75565487)
AA seq 522 aa
MASGGGGCSASERLPPPFPGMDPESEGAAGGSEPEAGDSDTEGEDIFTGAAAASKPQSPK
KTTSLFPIKNGSKENGIHEEQDQEPQDLFADATVELSLDSTQNNQKTMPGKTLIPHPTQE
ATNSPKPQPSYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSRQ
FAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRA
ALERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQALSGAGLLKMFNKATDAVSKMTI
KMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTALFAKSLAMLGSSEDN
TALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRW
QDAQATLQKKRESEARLLWANKPDKLQQAKDEITEWESRVTQYERDFERISTVVRKEVTR
FEKEKSKDFKNHVIKYLETLLHSQQQLAKYWEAFLPEARAIS
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggcgtcgggaggtggtggctgtagcgcttcggagcgactccctccgcccttccctgga
atggatccggagtccgaaggggctgccggggggtcagaacccgaggctggggacagcgac
accgagggggaggatattttcactggcgccgcggcagctagtaagccccagtctccaaag
aaaaccacatccctttttcctatcaaaaatggttccaaagaaaatgggatccatgaagaa
caagaccaagagccacaggacctctttgcagatgccacagtggaactatccctggacagc
acacagaataaccagaagacaatgccaggcaaaacacttattcctcatcctacgcaagaa
gccacaaattctcctaagccacagccaagctatgaagagctggaggaagaagaacaggag
gatcagtttgatttgacagttggtatcactgatcctgagaagatcggggacggtatgaat
gcctatgtagcctacaaagtcaccacacagacaagcttaccgatgttcagaagtaggcag
tttgcagtgaaaagaagattcagtgactttctgggtctttatgagaagctctcagagaag
cactcccagaatggtttcattgtccctcctccacctgagaagagcctaataggaatgaca
aaggtgaaggttgggaaggaagattcttcttctgcagagtttcttgagaaacggagggct
gctttggaaaggtaccttcaaagaattgtgaatcatcctaccatgttacaggacccagat
gtcagggagtttttagaaaaagaagagctgcctcgagctgtaggtacgcaggctctaagt
ggtgctggtctccttaagatgttcaacaaagctacagatgcagtcagcaaaatgaccatc
aagatgaatgaatcagacatttggttcgaggagaagctccaggaggtggagtgtgaggaa
cagcgcctacggaagctgcacgctgtggtggagactctagtcaaccataggaaagaacta
gcactgaatacagccctgtttgccaagagtctagccatgcttggcagctccgaggacaac
acagcactgtctcgagcactctcccaactggctgaggtggaagaaaagattgagcagctc
caccaggaacaggccaacaatgacttcttcctcctggctgaactcctgagtgactatatc
cgcctcctggccattgtccgagccgccttcgaccagcgcatgaagacatggcagcgctgg
caggatgctcaagccacgctgcagaagaagcgggagtctgaggctcggctgctgtgggcc
aacaagcctgacaaactgcagcaggctaaggatgagattacagagtgggaatctcgggtg
actcagtatgaaagggactttgaaaggatttcaacagttgtccgaaaggaggtgacacga
tttgagaaagagaaatccaaggacttcaaaaaccacgtgatcaagtacctggagacactc
ctgcattcccagcagcagctggcaaaatactgggaagccttccttcctgaggccagggcc
atctcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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