KEGG   Rattus norvegicus (rat): 84473
Entry
84473             CDS       T01003                                 
Symbol
Ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
  KO
K13131  ATP-dependent RNA helicase DDX20 [EC:3.6.4.13]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    84473 (Ddx20)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    84473 (Ddx20)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-GeneID: 84473
NCBI-ProteinID: NP_001178640
RGD: 621744
Ensembl: ENSRNOG00000015274
UniProt: F1MAM8
Position
2:complement(195847105..195859989)
AA seq 824 aa
MAAAFEALPASTTSESAMAAELEAAPVPAAEPTPASPWNLRTAHDIGGPRTRTGDVVLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHL
QELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEEN
MMMKIAQKCNINLLPLPDPIPAGLMEECLDCDVEVKAAMHTYSSPSISTQSPKKQVQKPE
RAFQSQRTPGSHMPSPRNTSVSTLSAKSKHGKQKLPVKSHSECGILEKAAPPQELGCTTH
PEEQVKNSVQTSTEESSSNSLHQAKETSPGSLPKIPCLSSFKVHQLSALTFAELVEDYEH
YIKEGLEKPVEIIRHYTGPGAQTVNPQNGFVRNRVSADRVQMLVSSSQSGDSESESDSCS
SRTSSQSKGNKSYLEGSSDTQLKDSECTSVGGPLSLEQIQNGNDTSTQVEYQESPETQVK
ARHKEGANQRSKPSRRNPPRRSSYRVQTEAQEEGWHDCHRETNASSSDPYQDYEEYWRAY
YRAWQEYYAAASHSYYWNAQRHPSWMAAYHMNTVYLQEMMRGNQ
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggcggcggcgtttgaagctctaccggcctcgacaacctccgaatccgctatggcggcg
gagcttgaggccgcaccggttccggctgcggagccaactcccgcctccccgtggaacctg
cggaccgctcacgacatcggcgggccgcgcacacgtaccggggacgtggtgctggcggag
cctgcggacttcgagtcgttgctgctgtcgcggcccgtgctggaggggctgcgggcggcc
ggcttcgagaggccctctcccgtgcagctcaaggccatcccgctggggcgctgcgggctt
gatttaattgttcaagctaaatctggcactggaaaaacttgtgtattctccaccattgct
ctggactcccttattcttgaaaactatagtactcagattttgatattggctcccacaaga
gaaattgctgttcagatacattctgttatcacagccattggaataaaaatggaaggatta
gaatgtcatgtctttattggagggactccattatcgcaagataaaaccagacttaaaaag
tgtcatattgctgttggctctcctggtagaattaaacagctcatagaacttgactacctg
aatccaggcagtatccgtctctttattcttgatgaagcagataagcttttagaagaaggc
agtttccaggagcaaataaattggatttactcctctttgcctgccagtaaacaaatgttg
gcagtgtctgctacttaccctgaaattttggctaatgctttgacaaggtatatgagagat
cccacttttgtaagattgaatcccagtgatccaagtctgataggtttgaagcagtactac
caagttgtcaactcttaccctttggctcataagatttttgaggaaaagactcagcactta
caggaactttttagtaaaatcccatttaatcaagccttggtgttttctaatttgcatagc
agagctcaacacttggctgatatcctctcttctaaaggttttcctactgaatgcatttca
ggtaacatgaatcagaatcagcgccttgatgctatggctaaactgaagcagtttcattgc
agagtcctcatttctacagatttgacttcccgtgggattgatgcggagaaggtgaatcta
gttgtaaatctggatgtgccgttagactgggagacttacatgcatcgaattggcagagct
ggccgttttggcacattgggactgacagtgacctactgttgtagaggggaagaagaaaat
atgatgatgaaaattgcccagaaatgtaatatcaaccttctccctttaccagatcctatt
cctgctggcttgatggaagaatgcttggattgcgatgtggaagttaaagctgcgatgcac
acttacagctcaccaagtatatctacccagtcccccaaaaagcaagttcaaaaaccagag
cgagccttccagtctcaaagaactcctggtagccatatgccttcccccagaaacacttct
gtatctacactgtcagccaaatcaaagcacggcaaacaaaagcttcctgtgaaaagccac
tcagagtgtgggatcctagaaaaggcagctccaccacaggagttgggctgtaccacacat
ccggaagagcaagttaagaactctgttcagacctctactgaggagtcctccagtaacagc
ctgcaccaggccaaagagacctcacctgggtcactccctaagattccttgtctgtcttcc
tttaaagtccatcagctgagtgctttgacttttgcagaactggtagaagattatgaacac
tatattaaagagggcttagagaaacctgtggaaattatccggcactacacaggacctggg
gctcagactgtgaatcctcagaatggttttgtgagaaacagagtttctgcagacagagtg
cagatgttggtgagtagtagccagtctggagactcagagagtgagagcgactcttgcagc
tccaggacttcttcccagagcaaaggcaataagtcttacttggaaggctcttctgacact
cagttgaaagactctgaatgtacttctgtgggtggccctctgtctttggaacaaattcag
aatggaaatgatacctcgactcaagtggagtatcaagaatcccctgaaacccaggtaaag
gcaaggcataaagaaggtgctaaccaaaggtctaaaccaagtcggagaaacccaccacgg
cgctcctcctaccgagtacagacagaagcccaggaagagggttggcatgactgtcacagg
gaaacaaacgcgagttcttcagatccctaccaggattatgaggagtactggagagcgtat
tacagggcatggcaagaatattatgctgctgcttcccattcatactattggaatgctcag
agacatccgagctggatggctgcctatcatatgaatacagtttatctacaagaaatgatg
cgtggtaaccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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