KEGG   Rattus norvegicus (rat): 84478
Entry
84478             CDS       T01003                                 
Symbol
Ufd1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    84478 (Ufd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    84478 (Ufd1)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    84478 (Ufd1)
SSDB
Motif
Pfam: UFD1 CDC48_2
Other DBs
NCBI-GeneID: 84478
NCBI-ProteinID: NP_445870
RGD: 619822
Ensembl: ENSRNOG00000047394
UniProt: Q9ES53
Position
11:complement(95665971..95689423)
AA seq 307 aa
MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGKKK
GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPMVKKVEEDEAGGRFVAFSGEGQSL
RKKGRKP
NT seq 924 nt   +upstreamnt  +downstreamnt
atgttttctttcaacatgtttgaccacccgattccccgggtcttccagaaccgcttctcc
acgcagtaccgctgcttctctgtatccatgctagcagggcctaatgacaggtcagatgtg
gagaaaggagggaagataattatgccaccctcagccctcgatcaactcagccggctcaac
attacctatcctatgctgtttaaattgaccaataagaattcagaccgaatgacacactgt
ggtgtactggagtttgttgctgatgaaggcatctgttacctcccccactggatgatgcag
aatttgctgttggaagaagggggcctggttcaggtggaaagtgtcaaccttcaggtggct
acttactctaagttccagcctcagagcccagacttcctggatatcaccaaccccaaagca
gtattagaaaatgcactgaggaacttcgcctgtctgacgactggagatgtgatcgctatc
aactacaatgagaagatctatgaactgcgggtgatggagaccaaaccggacaaggccgta
tccattattgaatgtgacatgaatgtggattttgatgctcccttgggctacaaagaacca
gaaagaccagtacagcatgaggagtcaatagagggagaagctgaccacagtggctatgct
ggagaagtgggcttccgtgccttctctggttctgggaatagactggatggaaagaaaaag
ggggttgaacccagtccctccccaatcaagcctggagacattaaaagaggaattcctaat
tacgaatttaagcttggtaagatcactttcatcagaaattcacgtccaatggtcaaaaag
gttgaagaggatgaagctggaggcagattcgttgctttctctggagaaggacagtcgctg
cggaagaagggaagaaagccctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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