KEGG   Rattus norvegicus (rat): 84479
Entry
84479             CDS       T01003                                 
Symbol
Synrg
Name
(RefSeq) synergin gamma
  KO
K25219  synergin gamma
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    84479 (Synrg)
Membrane trafficking [BR:rno04131]
 Endosome - Golgi transport
  Others
   Aftiphilin/p200/gamma-synergin complex
    84479 (Synrg)
SSDB
Motif
Pfam: EF-hand_4
Other DBs
NCBI-GeneID: 84479
NCBI-ProteinID: NP_445871
RGD: 620684
Ensembl: ENSRNOG00000053814
UniProt: Q9JKC9
Position
10:69346154..69428714
AA seq 1329 aa
MALRPGAGASGAAGAGTGPGGAGSFMFPVAGGMRPPQGLIPMQQQGFPMVSVMQPNMQGM
MGMNYSSQMSQGPIAMQAGIPMGPMPAAGVPFLGQPPFLGMRPAAPQYTPDMQKQFAEEQ
QKRFEQQQKLLEEERKRRQFEEQKQKLRLLSSVKPKTGEKNRDDALEAIKGNLDGFSRDA
KMHPTPASHPKKPDCPTSSHSTKTVSPSSAFLGEDEFSGFMQGPVELPTCGPSSTAQPFQ
SFLPSTPLGQLHTQKAGAQPLPPGQAPVSFAVHGVHGQIPCLSAASASHSVQKAGPSLEE
KLLVSCDISASGQEHIKLSSPEAGHRAVVPGSSKNSPGLMAHNGGAVDGCVSGPTTAVAE
KTSDQNLSKEESGVGVFPSQDPVQPRMPPWIYNESLVPDAYKKILETTMTPTGIDTAKLY
PILMSSGLPRETLGQIWALANRTTPGKLTKEELYTVLAMVAVTQRGVPAMSPDTLNQFPA
APIPTLSGFPMTLPTPVSQPTAMTSGPAGSIPLSLGQPIMGINLVGPVGGAAAPTSSGFM
PAYPSNQVGKTEEDDFQDFQDASKSGSIDDSFTDFQEVPASSKTSNSQHGNSAPSLLIPL
PGTKASTDKYAVFKGISAEKPSENPASFGESGDKYSAFRELEPTADSKPLGESFAEFRST
GTDDGFTDFKTADSVSPLEPPTKDSFPSAFASGAAQQTQTQVKTPLNLADLDMFSSVDCS
GEKPVPFSAAFSTSKSVSSRPQPAGSAAAPASLASTKASSLADDFGEFNLFGEYSNPASV
GEQDDFADFMAFGNSSIPSEPKADDKYEALREEGSPGALSTSTVEGAHNPPVSSSKYDVF
KQLSLEGAGLAIEEFKENTPSTKSDGDFADFHSSKFSSTSSDKSLGEKAVAFRHAKEDSA
SVKSLDLPSIGGSSVGKEDSEDALSVQFDMKLADVGGDLKHVMSDSSLDLPTVSGQHPPA
AGSALASEDALPETPFPAFASFKDMMPQTTEQKEYETGDFQDFTRQDMPMVDRSQENTCP
SPASSVASHETPKEGADDFGEFQSEKPKISKFDFLVANSQSKMKSSEEMIKSELATFDLS
VQGSHKRSLSLGDKEISRSSPSPALEQPFRDRSNTLSERAALPVIRDKYKDLTGEVEENE
RYAYEWQRCLGSALDVIKKANDTLNGISSSAVCTEVIQSAQGMEYLLGVVEVYRVTKRVE
LGIKATAVCSEKLQQLLKDIDKVWNNLIGFMSLTTLTPDENSLDFSSCMLRPGIKNAQEL
ACGVCLLNVDSRSRKEETPAEEQPKKAFNSETDSFKLAYGGHQYHASCANFWINCVEPKP
PGLLLPDLL
NT seq 3990 nt   +upstreamnt  +downstreamnt
atggcgctgcggccgggagccggagccagcggcgcggcgggggcgggcacagggcccggc
ggggcaggcagcttcatgtttcctgtcgcaggtggcatgagaccccctcaaggcctgatt
ccaatgcagcagcaaggatttcctatggtctctgtcatgcagcccaatatgcaaggcatg
atgggaatgaattacagctctcagatgtcccagggacccattgcaatgcaggcaggaata
ccaatggggccaatgccagcagcgggtgtacctttcctgggtcagccaccttttctgggc
atgcgtcctgcagccccacagtacactccagacatgcagaagcagtttgcggaagagcaa
caaaaacgatttgaacaacaacaaaagctcttagaagaagaaagaaaacgacgtcagttt
gaagagcaaaaacaaaagctcagacttctgagtagcgtgaaacccaagacaggagagaag
aacagagacgacgctttggaagccatcaaaggaaacttggatgggttttccagagatgct
aagatgcaccccactcccgcatctcacccaaagaaaccagactgccccacatcatctcat
tctactaaaactgtctccccgtcatctgcctttcttggtgaagatgaattcagtggcttt
atgcaggggcctgttgagcttcccacttgtgggccttcttccacagcccagccctttcag
tctttcctccccagcaccccactcggccagttacacacacagaaggctggggcacagcct
ctacctccaggtcaggctccagtgtcttttgccgtacatggtgtccatgggcaaattcct
tgtttatctgctgcttcagcttcccacagtgtgcagaaagcaggcccttccttggaagag
aagctcctagtatcttgtgatataagtgcatctgggcaggaacacattaaattaagctct
cctgaagctgggcacagagccgtagtcccaggttccagtaagaactctcccggtttaatg
gcccataacgggggtgctgtagatggatgtgtgagtggtcccaccactgcagtcgcagaa
aagacttcagatcaaaacctgtcaaaggaagagagtggtgtgggcgtgtttccctctcag
gatcctgttcagcccagaatgcctccttggatttacaatgagagtttggttccagatgct
tataagaaaattttagaaaccacaatgactccaaccggaatagacactgctaaactttat
cccattctgatgtcatctggacttcccagggaaactcttggacagatatgggccttagct
aatcgaactacgcctggcaagctcactaaggaggagctttacaccgttctcgccatggta
gcagtaacacagagaggtgttcctgccatgagccctgatactttgaaccagttccctgcg
gctcccattcctaccttaagcggctttcctatgactctgcctaccccagtgagccagcca
acagcgatgacctctggccccgcaggctccatacccctcagccttggacagcccatcatg
ggcattaaccttgttggaccagtgggtggagctgcagcgccaacttccagtggcttcatg
ccagcctacccctcaaaccaggtgggaaagacagaagaagatgacttccaggattttcaa
gatgcttcgaagtcaggatccatcgatgattctttcactgacttccaagaggtgcctgcg
tcctcaaaaaccagtaattcccagcatggaaacagtgctccctcactcttgatcccactt
cctggaactaaagcctccacagacaaatatgcagtgtttaaagggatttctgctgagaag
ccctctgaaaaccctgcttcatttggagagtccggtgataaatacagtgctttcagggaa
ctcgagccaacagcagacagtaagcctttaggagagagctttgcggagttcagatccaca
ggaaccgatgacggcttcactgacttcaagactgctgatagtgtgtcacccctagagcca
ccaacaaaagactcttttccatcggcctttgcctcaggagctgcacagcagacacagaca
caggtgaaaactcctctgaacttagcagacctagatatgttctcctcagtggattgcagt
ggggagaaaccagtgcccttttcagctgcatttagcacctcaaagtcagtttcctcaaga
cctcagccggcgggttctgcagcagccccagcatcactggcatccactaaagcgtccagt
ttggcagatgattttggagagttcaacctctttggggaatattcgaaccctgcgtctgtt
ggggagcaggacgactttgcagatttcatggctttcggtaacagctccatcccctctgag
ccaaaagcagatgacaagtatgaagccctcagagaagaagggagccccggcgccttgtcc
accagcactgtggagggtgcacacaacccacctgtttcgtcatccaagtacgacgtcttc
aaacagctttccctagagggagctggactggccatcgaggagttcaaagagaacactcct
tccacaaagagtgacggtgactttgctgacttccactccagtaaattctcatccacgagc
tcagacaaatccctgggagagaaagcagtggctttcagacatgccaaagaagactccgcc
tcggtgaagtctttagacctcccctccatcggtggcagcagtgttggcaaggaggactct
gaagatgcgctttctgttcagtttgacatgaagttggctgatgtaggaggagatcttaag
catgtcatgtctgatagctctttggatttaccaacagttagtggccaacatcctcctgcc
gcaggatcagccttggccagtgaggacgctcttccagagactcccttcccagcttttgcc
agctttaaagacatgatgccccagaccactgagcagaaagagtatgaaactggggacttc
caggatttcacaaggcaggacatgcccatggtggaccggagccaagagaacacatgtccc
agcccagcttccagtgtggcctcgcacgaaacccccaaggagggtgcagacgactttgga
gaatttcaaagtgaaaagcccaaaatcagcaagtttgactttttagtagctaattcacag
agcaaaatgaagtctagtgaagaaatgatcaaaagtgagctggcaacctttgacctttct
gttcaaggatcacacaagaggagcttgagccttggggataaagaaataagcaggtcctct
ccttccccggccctggagcagcccttcagagaccggtccaacactctgagtgagagagct
gcactgcccgtcatccgagacaagtacaaggatctgactggcgaagtggaggaaaatgag
agatacgcgtatgagtggcagagatgcctggggagcgccctggatgtcattaagaaggca
aacgacaccttaaacggcattagcagcagtgctgtctgcacagaagttatccagtcagcc
caaggcatggagtatctcctaggcgtggtggaagtgtaccgagtaaccaagcgcgtggag
ctggggatcaaagccactgctgtgtgtagtgagaaactccagcagttgctgaaggacatc
gataaagtgtggaacaacttaatcggcttcatgtcacttaccacactcacgccagatgag
aattcactggatttttcctcctgtatgttacggcctgggatcaaaaacgcccaggagctg
gcttgtggagtgtgtctcctaaatgtggactccagaagccggaaagaagagacacctgca
gaagaacagcctaaaaaagcattcaactcagaaacagacagtttcaagctggcctatggg
ggacatcagtaccacgccagctgtgccaacttctggatcaactgtgttgaacccaagcct
cccggcctcctcttgccagatctgctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (19)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (17)   
DNA sequence (35)   
   RefSeq(nuc) (17)   
   GenBank (9)   
   EMBL (9)   
Protein domain (1)   
   Pfam (1)   
All databases (80)   

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