KEGG   Rattus norvegicus (rat): 84487
Entry
84487             CDS       T01003                                 
Symbol
Slc17a6
Name
(RefSeq) vesicular glutamate transporter 2
  KO
K12302  MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6/7/8
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04721  Synaptic vesicle cycle
rno04723  Retrograde endocannabinoid signaling
rno04724  Glutamatergic synapse
rno05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    84487 (Slc17a6)
   04723 Retrograde endocannabinoid signaling
    84487 (Slc17a6)
   04721 Synaptic vesicle cycle
    84487 (Slc17a6)
 09160 Human Diseases
  09165 Substance dependence
   05033 Nicotine addiction
    84487 (Slc17a6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    84487 (Slc17a6)
Transporters [BR:rno02000]
 Solute carrier family (SLC)
  SLC17: Vesicular glutamate transporter
   84487 (Slc17a6)
 Major facilitator superfamily (MFS)
  Organic acid transporters
   Anion:cation symporter (ACS) family [TC:2.A.1.14]
    84487 (Slc17a6)
SSDB
Motif
Pfam: MFS_1
Other DBs
NCBI-GeneID: 84487
NCBI-ProteinID: NP_445879
RGD: 620531
Ensembl: ENSRNOG00000016147
Vega: OTTRNOG00000002177
UniProt: Q9JI12
Structure
Position
1:110348447..110388499
AA seq 582 aa
MESVKQRILAPGKEGIKNFAGKSLGQIYRVLEKKQDNRETIELTEDGKPLEVPEKKAPLC
DCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVAIVDMVNNSTIHRGGKVIKEKAKFNWD
PETVGMIHGSFFWGYIITQIPGGYIASRLAANRVFGAAILLTSTLNMLIPSAARVHYGCV
IFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQYT
GWSSVFYVYGSFGMVWYMFWLLVSYESPAKHPTITDEERRYIEESIGESANLLGAMEKFK
TPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPHLVMT
IIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFLVLAV
GFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKNKSREEWQYVF
LIAALVHYGGVIFYALFASGEKQPWADPEETSEEKCGFIHEDELDEETGDITQNYINYGT
TKSYGATSQENGGWPNGWEKKEEFVQESAQDAYSYKDRDDYS
NT seq 1749 nt   +upstreamnt  +downstreamnt
atggagtcggtaaaacaaaggattttggccccggggaaagaggggataaagaattttgct
ggaaaatccctcggacagatctacagggtgctggagaagaagcaggataaccgagagacc
atcgagctgacagaggacggcaagcccctggaggtgcctgagaagaaggctccgctatgc
gactgtacgtgcttcggcctgccgcgccgctacatcatagccatcatgagcggcctcggc
ttctgcatctcctttggtatccgctgtaacctgggtgtggccattgtggacatggtcaac
aacagcaccatccaccggggtggcaaagttatcaaggagaaagccaagtttaactgggac
cccgagactgtggggatgattcacgggtcgttcttctggggctatatcatcacgcagatt
ccgggcggatacatcgcatcgcgactggctgctaaccgggtctttggggctgccatactg
cttacctctaccctcaatatgctgatcccatctgcagccagagtgcattatggatgcgtc
atctttgttagaatattgcaaggacttgtggagggcgtcacctacccagcctgtcacggg
atatggagcaagtgggcccctcctttggagaggagtaggttggctaccacctccttctgt
ggttcctatgctggagcagtcattgcaatgcccctagctggtatcctggtgcagtacact
ggatggtcttcagtattttacgtatatggaagctttggtatggtctggtatatgttctgg
cttctggtgtcttacgagagccccgcaaagcatccaaccataacagacgaagaacgtagg
tacatagaagagagcatcggggagagcgcaaatctgttaggagcaatggagaaattcaag
accccatggaggaagtttttcacatccatgcccgtctatgcgataattgttgcaaacttc
tgcaggagttggactttttatttactgctcatcagtcaaccagcttatttcgaggaggtt
tttggatttgaaatcagcaaggttggcatgttgtctgcggtcccacacctggtcatgaca
atcattgtgcctatcggggggcaaattgcagactttctaaggagcaagcaaattctttca
acaactacagtgcgaaagatcatgaactgcgggggttttggcatggaagccacactgctt
ctggttgttggctactctcatactagaggggtggccatctccttcttggtgcttgcagtg
ggattcagtggatttgctatctctggtttcaatgtgaaccacttggatattgccccgaga
tatgccagtatcttaatgggcatttcaaatggtgttggcacgctgtcgggaatggtctgc
ccgatcattgttggtgcaatgacgaagaacaagtcccgtgaagaatggcagtatgtcttc
ctcatcgctgcactggtccactatggtggagtcatattttatgcactatttgcctcagga
gagaagcaaccttgggcagaccctgaggaaacaagcgaagaaaagtgtggcttcattcat
gaagatgaactggatgaagaaacgggggacatcactcagaattacataaattacggtacc
accaaatcctacggcgccacctcacaggagaacggaggctggcctaacggctgggagaaa
aaggaagaatttgtgcaagaaagtgcgcaagacgcgtactcctataaggaccgagatgat
tattcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
3D Structure (3)   
   PDB (3)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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